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PTGS1 prostaglandin-endoperoxide synthase 1 [ Ailuropoda melanoleuca (giant panda) ]

Gene ID: 100481235, updated on 8-Mar-2024

Summary

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Gene symbol
PTGS1
Gene description
prostaglandin-endoperoxide synthase 1
Locus tag
PANDA_004027
See related
Ensembl:ENSAMEG00000000730
Gene type
protein coding
RefSeq status
MODEL
Organism
Ailuropoda melanoleuca
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Ursidae; Ailuropoda
Orthologs
human mouse all
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Genomic context

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See PTGS1 in Genome Data Viewer
Location:
chromosome: 7
Exon count:
12
Annotation release Status Assembly Chr Location
103 current ASM200744v2 (GCF_002007445.1) 7 NC_048224.1 (48436845..48460614)
102 previous assembly AilMel_1.0 (GCF_000004335.2) Unplaced Scaffold NW_003217403.1 (61353..85007, complement)

Chromosome 7 - NC_048224.1Genomic Context describing neighboring genes Neighboring gene RNA binding motif protein 18 Neighboring gene mitochondrial ribosome recycling factor Neighboring gene uncharacterized LOC109489098 Neighboring gene olfactory receptor 1L1-like Neighboring gene olfactory receptor 1L8-like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables heme binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables peroxidase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables prostaglandin-endoperoxide synthase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cyclooxygenase pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in response to oxidative stress IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in neuron projection IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
prostaglandin G/H synthase 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Ailuropoda melanoleuca Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM200744v2 Primary Assembly

Genomic

  1. NC_048224.1 Reference ASM200744v2 Primary Assembly

    Range
    48436845..48460614
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_002915947.4 → XP_002915993.2  prostaglandin G/H synthase 1 isoform X1

    UniProtKB/TrEMBL
    D2H2Z1, G1L1M8
    Related
    ENSAMEP00000000781.2, ENSAMET00000000808.2
    Conserved Domains (2) summary
    cd09816
    Location:91 → 577
    prostaglandin_endoperoxide_synthase; Animal prostaglandin endoperoxide synthase and related bacterial proteins
    cd00054
    Location:34 → 71
    EGF_CA; Calcium-binding EGF-like domain, present in a large number of membrane-bound and extracellular (mostly animal) proteins. Many of these proteins require calcium for their biological function and calcium-binding sites have been found to be located at the ...

  2. XM_034664455.1 → XP_034520346.1  prostaglandin G/H synthase 1 isoform X2

    UniProtKB/TrEMBL
    D2H2Z1

  3. XM_019796102.2 → XP_019651661.1  prostaglandin G/H synthase 1 isoform X2

    UniProtKB/TrEMBL
    D2H2Z1
Nucleotide Protein
Heading Accession and Version

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