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CHPF2 chondroitin polymerizing factor 2 [ Ailuropoda melanoleuca (giant panda) ]

Gene ID: 100481231, updated on 8-Mar-2024

Summary

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Gene symbol
CHPF2
Gene description
chondroitin polymerizing factor 2
See related
Ensembl:ENSAMEG00000013565
Gene type
protein coding
RefSeq status
MODEL
Organism
Ailuropoda melanoleuca
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Ursidae; Ailuropoda
Orthologs
human mouse all
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Genomic context

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See CHPF2 in Genome Data Viewer
Location:
chromosome: 1
Exon count:
5
Annotation release Status Assembly Chr Location
103 current ASM200744v2 (GCF_002007445.1) 1 NC_048218.1 (206623322..206629051)
102 previous assembly AilMel_1.0 (GCF_000004335.2) Unplaced Scaffold NW_003217385.1 (2469225..2474976, complement)

Chromosome 1 - NC_048218.1Genomic Context describing neighboring genes Neighboring gene late histone H2B.L4 Neighboring gene ATP binding cassette subfamily F member 2 Neighboring gene SWI/SNF related BAF chromatin remodeling complex subunit D3 Neighboring gene uncharacterized LOC117795343

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables glucuronosyl-N-acetylgalactosaminyl-proteoglycan 4-beta-N-acetylgalactosaminyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in chondroitin sulfate biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in Golgi cisterna membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
chondroitin sulfate glucuronyltransferase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Ailuropoda melanoleuca Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM200744v2 Primary Assembly

Genomic

  1. NC_048218.1 Reference ASM200744v2 Primary Assembly

    Range
    206623322..206629051
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_034639681.1 → XP_034495572.1  chondroitin sulfate glucuronyltransferase

    UniProtKB/TrEMBL
    A0A7N5P3F7, G1M4M4
    Related
    ENSAMEP00000030309.1, ENSAMET00000033178.1

  2. XM_034639687.1 → XP_034495578.1  chondroitin sulfate glucuronyltransferase

    UniProtKB/TrEMBL
    A0A7N5P3F7, G1M4M4

  3. XM_034639674.1 → XP_034495565.1  chondroitin sulfate glucuronyltransferase

    UniProtKB/TrEMBL
    A0A7N5P3F7, G1M4M4
Nucleotide Protein
Heading Accession and Version

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