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GAPT GRB2 binding adaptor protein, transmembrane [ Ailuropoda melanoleuca (giant panda) ]

Gene ID: 100478727, updated on 8-Mar-2024

Summary

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Gene symbol
GAPT
Gene description
GRB2 binding adaptor protein, transmembrane
Locus tag
PANDA_006810
Gene type
protein coding
RefSeq status
MODEL
Organism
Ailuropoda melanoleuca
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Ursidae; Ailuropoda
Orthologs
human mouse all
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Genomic context

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See GAPT in Genome Data Viewer
Location:
chromosome: 3
Exon count:
3
Annotation release Status Assembly Chr Location
103 current ASM200744v2 (GCF_002007445.1) 3 NC_048220.1 (38262755..38270979)
102 previous assembly AilMel_1.0 (GCF_000004335.2) Unplaced Scaffold NW_003217540.1 (1669980..1675051, complement)

Chromosome 3 - NC_048220.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC117801391 Neighboring gene polo like kinase 2 Neighboring gene RAB3C, member RAS oncogene family Neighboring gene elongin-B-like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. The sequence and de novo assembly of the giant panda genome. Li R, et al. Nature, 2010 Jan 21. PMID 20010809, Free PMC Article
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
protein GAPT

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Ailuropoda melanoleuca Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM200744v2 Primary Assembly

Genomic

  1. NC_048220.1 Reference ASM200744v2 Primary Assembly

    Range
    38262755..38270979
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_011223770.3 → XP_011222072.1  protein GAPT

    See identical proteins and their annotated locations for XP_011222072.1

    Conserved Domains (1) summary
    pfam11770
    Location:132 → 285
    GAPT; GRB2-binding adapter (GAPT)

  2. XM_011223769.3 → XP_011222071.1  protein GAPT

    See identical proteins and their annotated locations for XP_011222071.1

    Conserved Domains (1) summary
    pfam11770
    Location:132 → 285
    GAPT; GRB2-binding adapter (GAPT)
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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