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IPMK inositol polyphosphate multikinase [ Ailuropoda melanoleuca (giant panda) ]

Gene ID: 100478367, updated on 8-Mar-2024

Summary

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Gene symbol
IPMK
Gene description
inositol polyphosphate multikinase
Locus tag
PANDA_019382
See related
Ensembl:ENSAMEG00000010271
Gene type
protein coding
RefSeq status
MODEL
Organism
Ailuropoda melanoleuca
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Ursidae; Ailuropoda
Orthologs
human mouse all
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Genomic context

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See IPMK in Genome Data Viewer
Location:
chromosome: 6
Exon count:
6
Annotation release Status Assembly Chr Location
103 current ASM200744v2 (GCF_002007445.1) 6 NC_048223.1 (63379725..63424631, complement)
102 previous assembly AilMel_1.0 (GCF_000004335.2) Unplaced Scaffold NW_003219038.1 (21432..61907, complement)

Chromosome 6 - NC_048223.1Genomic Context describing neighboring genes Neighboring gene proteasome subunit alpha type-2-like Neighboring gene U6 spliceosomal RNA Neighboring gene CDGSH iron sulfur domain 1 Neighboring gene serine/threonine-protein phosphatase PP1-gamma catalytic subunit A-like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. The sequence and de novo assembly of the giant panda genome. Li R, et al. Nature, 2010 Jan 21. PMID 20010809, Free PMC Article
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables inositol tetrakisphosphate kinase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables inositol-1,4,5-trisphosphate 3-kinase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in inositol phosphate biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
inositol polyphosphate multikinase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Ailuropoda melanoleuca Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM200744v2 Primary Assembly

Genomic

  1. NC_048223.1 Reference ASM200744v2 Primary Assembly

    Range
    63379725..63424631 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_011237218.3 → XP_011235520.1  inositol polyphosphate multikinase isoform X1

    UniProtKB/TrEMBL
    G1LUP1
    Related
    ENSAMEP00000010790.2, ENSAMET00000011253.2
    Conserved Domains (1) summary
    pfam03770
    Location:130 → 414
    IPK; Inositol polyphosphate kinase

  2. XM_002929214.4 → XP_002929260.1  inositol polyphosphate multikinase isoform X2

    See identical proteins and their annotated locations for XP_002929260.1

    UniProtKB/TrEMBL
    D2I215
    Conserved Domains (1) summary
    pfam03770
    Location:127 → 411
    IPK; Inositol polyphosphate kinase
Nucleotide Protein
Heading Accession and Version

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