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AGL amylo-alpha-1, 6-glucosidase, 4-alpha-glucanotransferase [ Ailuropoda melanoleuca (giant panda) ]

Gene ID: 100478160, updated on 8-Mar-2024

Summary

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Gene symbol
AGL
Gene description
amylo-alpha-1, 6-glucosidase, 4-alpha-glucanotransferase
Locus tag
PANDA_009617
See related
Ensembl:ENSAMEG00000009054
Gene type
protein coding
RefSeq status
MODEL
Organism
Ailuropoda melanoleuca
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Ursidae; Ailuropoda
Orthologs
human mouse all
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Genomic context

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See AGL in Genome Data Viewer
Location:
chromosome: 2
Exon count:
35
Annotation release Status Assembly Chr Location
103 current ASM200744v2 (GCF_002007445.1) 2 NC_048219.1 (68972387..69055571)
102 previous assembly AilMel_1.0 (GCF_000004335.2) Unplaced Scaffold NW_003217736.1 (580397..662713, complement)

Chromosome 2 - NC_048219.1Genomic Context describing neighboring genes Neighboring gene palmdelphin Neighboring gene ferric chelate reductase 1 Neighboring gene solute carrier family 35 member A3 Neighboring gene major facilitator superfamily domain containing 14A Neighboring gene SAS-6 centriolar assembly protein

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables 4-alpha-glucanotransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables amylo-alpha-1,6-glucosidase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in glycogen biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in glycogen catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
glycogen debranching enzyme

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Ailuropoda melanoleuca Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM200744v2 Primary Assembly

Genomic

  1. NC_048219.1 Reference ASM200744v2 Primary Assembly

    Range
    68972387..69055571
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_011226927.3 → XP_011225229.1  glycogen debranching enzyme

    UniProtKB/TrEMBL
    D2HFF1, G1LR84
    Related
    ENSAMEP00000009568.1, ENSAMET00000009982.2
    Conserved Domains (5) summary
    cd11327
    Location:105 → 584
    AmyAc_Glg_debranch_2; Alpha amylase catalytic domain found in glycogen debranching enzymes
    TIGR01531
    Location:22 → 1533
    glyc_debranch; glycogen debranching enzymye
    pfam06202
    Location:1074 → 1528
    GDE_C; Amylo-alpha-1,6-glucosidase
    pfam14699
    Location:31 → 116
    hGDE_N; N-terminal domain from the human glycogen debranching enzyme
    pfam14702
    Location:698 → 975
    hGDE_central; central domain of human glycogen debranching enzyme

  2. XM_019801294.2 → XP_019656853.1  glycogen debranching enzyme

    UniProtKB/TrEMBL
    D2HFF1, G1LR84
Nucleotide Protein
Heading Accession and Version

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