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LCLAT1 lysocardiolipin acyltransferase 1 [ Ailuropoda melanoleuca (giant panda) ]

Gene ID: 100476509, updated on 8-Mar-2024

Summary

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Gene symbol
LCLAT1
Gene description
lysocardiolipin acyltransferase 1
Locus tag
PANDA_017747
See related
Ensembl:ENSAMEG00000011679
Gene type
protein coding
RefSeq status
MODEL
Organism
Ailuropoda melanoleuca
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Ursidae; Ailuropoda
Orthologs
human mouse all
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Genomic context

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See LCLAT1 in Genome Data Viewer
Location:
chromosome: 4
Exon count:
12
Annotation release Status Assembly Chr Location
103 current ASM200744v2 (GCF_002007445.1) 4 NC_048221.1 (120328676..120522896, complement)
102 previous assembly AilMel_1.0 (GCF_000004335.2) Unplaced Scaffold NW_003218649.1 (226443..410240, complement)

Chromosome 4 - NC_048221.1Genomic Context describing neighboring genes Neighboring gene polypeptide N-acetylgalactosaminyltransferase 14 Neighboring gene calpain 13 Neighboring gene uncharacterized LOC117802035 Neighboring gene uncharacterized LOC117802034 Neighboring gene uncharacterized LOC105241405

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. The sequence and de novo assembly of the giant panda genome. Li R, et al. Nature, 2010 Jan 21. PMID 20010809, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables acyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endomembrane system IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
lysocardiolipin acyltransferase 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Ailuropoda melanoleuca Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM200744v2 Primary Assembly

Genomic

  1. NC_048221.1 Reference ASM200744v2 Primary Assembly

    Range
    120328676..120522896 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_034659699.1 → XP_034515590.1  lysocardiolipin acyltransferase 1 isoform X7

  2. XM_034659698.1 → XP_034515589.1  lysocardiolipin acyltransferase 1 isoform X6

  3. XM_034659697.1 → XP_034515588.1  lysocardiolipin acyltransferase 1 isoform X5

    UniProtKB/TrEMBL
    A0A7N5JU63

  4. XM_034659687.1 → XP_034515578.1  lysocardiolipin acyltransferase 1 isoform X2

    UniProtKB/TrEMBL
    A0A7N5JU63, A0A7N5K9A9
    Related
    ENSAMEP00000036859.1, ENSAMET00000030722.1

  5. XM_034659692.1 → XP_034515583.1  lysocardiolipin acyltransferase 1 isoform X2

    UniProtKB/TrEMBL
    A0A7N5JU63, A0A7N5K9A9

  6. XM_034659695.1 → XP_034515586.1  lysocardiolipin acyltransferase 1 isoform X5

    UniProtKB/TrEMBL
    A0A7N5JU63

  7. XM_034659686.1 → XP_034515577.1  lysocardiolipin acyltransferase 1 isoform X2

    UniProtKB/TrEMBL
    A0A7N5JU63, A0A7N5K9A9

  8. XM_034659688.1 → XP_034515579.1  lysocardiolipin acyltransferase 1 isoform X2

    UniProtKB/TrEMBL
    A0A7N5JU63, A0A7N5K9A9

  9. XM_034659691.1 → XP_034515582.1  lysocardiolipin acyltransferase 1 isoform X2

    UniProtKB/TrEMBL
    A0A7N5JU63, A0A7N5K9A9

  10. XM_034659696.1 → XP_034515587.1  lysocardiolipin acyltransferase 1 isoform X5

    UniProtKB/TrEMBL
    A0A7N5JU63

  11. XM_019808583.2 → XP_019664142.1  lysocardiolipin acyltransferase 1 isoform X2

    UniProtKB/TrEMBL
    A0A7N5JU63, A0A7N5K9A9

  12. XM_034659689.1 → XP_034515580.1  lysocardiolipin acyltransferase 1 isoform X2

    UniProtKB/TrEMBL
    A0A7N5JU63, A0A7N5K9A9

  13. XM_034659694.1 → XP_034515585.1  lysocardiolipin acyltransferase 1 isoform X4

    UniProtKB/TrEMBL
    D2HYF6

  14. XM_034659685.1 → XP_034515576.1  lysocardiolipin acyltransferase 1 isoform X1

    UniProtKB/TrEMBL
    D2HYF6

  15. XM_034659693.1 → XP_034515584.1  lysocardiolipin acyltransferase 1 isoform X3

    UniProtKB/TrEMBL
    D2HYF6, G1LYX8
    Related
    ENSAMEP00000012285.2, ENSAMET00000012808.2
Nucleotide Protein
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