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RFT1 RFT1 homolog [ Ailuropoda melanoleuca (giant panda) ]

Gene ID: 100476392, updated on 8-Mar-2024

Summary

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Gene symbol
RFT1
Gene description
RFT1 homolog
Locus tag
PANDA_007561
See related
Ensembl:ENSAMEG00000008029
Gene type
protein coding
RefSeq status
MODEL
Organism
Ailuropoda melanoleuca
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Ursidae; Ailuropoda
Orthologs
human mouse all
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Genomic context

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See RFT1 in Genome Data Viewer
Location:
chromosome: 4
Exon count:
14
Annotation release Status Assembly Chr Location
103 current ASM200744v2 (GCF_002007445.1) 4 NC_048221.1 (20996694..21044183, complement)
102 previous assembly AilMel_1.0 (GCF_000004335.2) Unplaced Scaffold NW_003217590.1 (315269..351051)

Chromosome 4 - NC_048221.1Genomic Context describing neighboring genes Neighboring gene STIM activating enhancer Neighboring gene Scm like with four mbt domains 1 Neighboring gene uncharacterized LOC109489577 Neighboring gene protein kinase C delta

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in dolichol-linked oligosaccharide biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in glycolipid translocation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endoplasmic reticulum membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
protein RFT1 homolog

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Ailuropoda melanoleuca Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM200744v2 Primary Assembly

Genomic

  1. NC_048221.1 Reference ASM200744v2 Primary Assembly

    Range
    20996694..21044183 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_034658468.1 → XP_034514359.1  protein RFT1 homolog isoform X2

    UniProtKB/TrEMBL
    D2HAS0

  2. XM_011224614.3 → XP_011222916.1  protein RFT1 homolog isoform X1

    UniProtKB/TrEMBL
    D2HAS0, G1LN22
    Related
    ENSAMEP00000008448.1, ENSAMET00000008804.2
    Conserved Domains (1) summary
    pfam04506
    Location:11 → 524
    Rft-1; Rft protein
Nucleotide Protein
Heading Accession and Version

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