U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

ACAA1 acetyl-CoA acyltransferase 1 [ Ailuropoda melanoleuca (giant panda) ]

Gene ID: 100475784, updated on 8-Mar-2024

Summary

Go to the top of the page Help
Gene symbol
ACAA1
Gene description
acetyl-CoA acyltransferase 1
Locus tag
PANDA_002594
See related
Ensembl:ENSAMEG00000017775
Gene type
protein coding
RefSeq status
MODEL
Organism
Ailuropoda melanoleuca
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Ursidae; Ailuropoda
Orthologs
human mouse all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See ACAA1 in Genome Data Viewer
Location:
chromosome: 6
Exon count:
12
Annotation release Status Assembly Chr Location
103 current ASM200744v2 (GCF_002007445.1) 6 NC_048223.1 (37200300..37210457)
102 previous assembly AilMel_1.0 (GCF_000004335.2) Unplaced Scaffold NW_003217344.1 (570856..581021)

Chromosome 6 - NC_048223.1Genomic Context describing neighboring genes Neighboring gene SAP domain-containing ribonucleoprotein-like Neighboring gene MYD88 innate immune signal transduction adaptor Neighboring gene DLEC1 cilia and flagella associated protein Neighboring gene phospholipase C delta 1 Neighboring gene villin like

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. The sequence and de novo assembly of the giant panda genome. Li R, et al. Nature, 2010 Jan 21. PMID 20010809, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables acetyl-CoA C-acyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in fatty acid beta-oxidation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in phenylacetate catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in peroxisome IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
3-ketoacyl-CoA thiolase, peroxisomal

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Ailuropoda melanoleuca Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM200744v2 Primary Assembly

Genomic

  1. NC_048223.1 Reference ASM200744v2 Primary Assembly

    Range
    37200300..37210457
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_019794545.2 → XP_019650104.1  3-ketoacyl-CoA thiolase, peroxisomal isoform X2

  2. XM_002914634.4 → XP_002914680.1  3-ketoacyl-CoA thiolase, peroxisomal isoform X1

    See identical proteins and their annotated locations for XP_002914680.1

    UniProtKB/TrEMBL
    D2GZQ8, G1MHF7
    Related
    ENSAMEP00000018792.2, ENSAMET00000019544.2
    Conserved Domains (2) summary
    PLN02287
    Location:1 → 422
    PLN02287; 3-ketoacyl-CoA thiolase
    cd00751
    Location:41 → 423
    thiolase; Thiolase are ubiquitous enzymes that catalyze the reversible thiolytic cleavage of 3-ketoacyl-CoA into acyl-CoA and acetyl-CoA, a 2-step reaction involving a covalent intermediate formed with a catalytic cysteine. They are found in prokaryotes and ...
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases
Research Materials