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HEXA hexosaminidase subunit alpha [ Ailuropoda melanoleuca (giant panda) ]

Gene ID: 100474638, updated on 8-Mar-2024

Summary

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Gene symbol
HEXA
Gene description
hexosaminidase subunit alpha
Locus tag
PANDA_008408
See related
Ensembl:ENSAMEG00000005903
Gene type
protein coding
RefSeq status
MODEL
Organism
Ailuropoda melanoleuca
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Ursidae; Ailuropoda
Orthologs
human mouse all
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Genomic context

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See HEXA in Genome Data Viewer
Location:
chromosome: 5
Exon count:
15
Annotation release Status Assembly Chr Location
103 current ASM200744v2 (GCF_002007445.1) 5 NC_048222.1 (36083476..36112687)
102 previous assembly AilMel_1.0 (GCF_000004335.2) Unplaced Scaffold NW_003217645.1 (1164077..1190872)

Chromosome 5 - NC_048222.1Genomic Context describing neighboring genes Neighboring gene transmembrane protein 202 Neighboring gene NADH dehydrogenase (ubiquinone) complex I, assembly factor 6-like Neighboring gene CUGBP Elav-like family member 6 Neighboring gene poly(ADP-ribose) polymerase family member 6

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. The sequence and de novo assembly of the giant panda genome. Li R, et al. Nature, 2010 Jan 21. PMID 20010809, Free PMC Article
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables beta-N-acetylhexosaminidase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in carbohydrate metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in ganglioside catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in glycosaminoglycan metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
beta-hexosaminidase subunit alpha

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Ailuropoda melanoleuca Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM200744v2 Primary Assembly

Genomic

  1. NC_048222.1 Reference ASM200744v2 Primary Assembly

    Range
    36083476..36112687
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_034660708.1 → XP_034516599.1  beta-hexosaminidase subunit alpha isoform X1

    UniProtKB/TrEMBL
    D2HCS0, G1LHA7
    Related
    ENSAMEP00000006302.2, ENSAMET00000006561.2

  2. XM_034660709.1 → XP_034516600.1  beta-hexosaminidase subunit alpha isoform X2

    UniProtKB/TrEMBL
    D2HCS0

  3. XM_019800161.2 → XP_019655720.1  beta-hexosaminidase subunit alpha isoform X4

  4. XM_034660710.1 → XP_034516601.1  beta-hexosaminidase subunit alpha isoform X3

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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