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PTGDS prostaglandin D2 synthase [ Ailuropoda melanoleuca (giant panda) ]

Gene ID: 100474593, updated on 8-Mar-2024

Summary

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Gene symbol
PTGDS
Gene description
prostaglandin D2 synthase
Locus tag
PANDA_020263
See related
Ensembl:ENSAMEG00000013340
Gene type
protein coding
RefSeq status
MODEL
Organism
Ailuropoda melanoleuca
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Ursidae; Ailuropoda
Orthologs
human mouse all
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Genomic context

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See PTGDS in Genome Data Viewer
Location:
chromosome: 7
Exon count:
7
Annotation release Status Assembly Chr Location
103 current ASM200744v2 (GCF_002007445.1) 7 NC_048224.1 (59939406..59942694)
102 previous assembly AilMel_1.0 (GCF_000004335.2) Unplaced Scaffold NW_003219346.1 (147329..150462)

Chromosome 7 - NC_048224.1Genomic Context describing neighboring genes Neighboring gene complement C8 gamma chain Neighboring gene lipocalin 12 Neighboring gene uncharacterized LOC109488397 Neighboring gene lipocalin like 1 Neighboring gene PAXX non-homologous end joining factor

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables small molecule binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in extracellular space IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
prostaglandin-H2 D-isomerase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Ailuropoda melanoleuca Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM200744v2 Primary Assembly

Genomic

  1. NC_048224.1 Reference ASM200744v2 Primary Assembly

    Range
    59939406..59942694
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_002929895.4 → XP_002929941.2  prostaglandin-H2 D-isomerase

    UniProtKB/TrEMBL
    G1M411
    Related
    ENSAMEP00000014074.2, ENSAMET00000014662.2
Nucleotide Protein
Heading Accession and Version

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