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B3GALT5 beta-1,3-galactosyltransferase 5 [ Ailuropoda melanoleuca (giant panda) ]

Gene ID: 100474238, updated on 8-Mar-2024

Summary

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Gene symbol
B3GALT5
Gene description
beta-1,3-galactosyltransferase 5
Locus tag
PANDA_018330
Gene type
protein coding
RefSeq status
MODEL
Organism
Ailuropoda melanoleuca
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Ursidae; Ailuropoda
Orthologs
human mouse all
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Genomic context

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See B3GALT5 in Genome Data Viewer
Location:
chromosome: 1
Exon count:
2
Annotation release Status Assembly Chr Location
103 current ASM200744v2 (GCF_002007445.1) 1 NC_048218.1 (5786784..5791125, complement)
102 previous assembly AilMel_1.0 (GCF_000004335.2) Unplaced Scaffold NW_003218775.1 (459233..463562)

Chromosome 1 - NC_048218.1Genomic Context describing neighboring genes Neighboring gene Purkinje cell protein 4 Neighboring gene immunoglobulin superfamily member 5 Neighboring gene SH3 domain-binding glutamic acid-rich protein Neighboring gene lebercilin LCA5 like Neighboring gene guided entry of tail-anchored proteins factor 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables UDP-galactose:beta-N-acetylglucosamine beta-1,3-galactosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
beta-1,3-galactosyltransferase 5

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Ailuropoda melanoleuca Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM200744v2 Primary Assembly

Genomic

  1. NC_048218.1 Reference ASM200744v2 Primary Assembly

    Range
    5786784..5791125 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_019809110.2 → XP_019664669.1  beta-1,3-galactosyltransferase 5

    UniProtKB/TrEMBL
    D2HZR9, G1MM90
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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