U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

CERS6 ceramide synthase 6 [ Ailuropoda melanoleuca (giant panda) ]

Gene ID: 100473865, updated on 8-Mar-2024

Summary

Go to the top of the page Help
Gene symbol
CERS6
Gene description
ceramide synthase 6
Locus tag
PANDA_004645
See related
Ensembl:ENSAMEG00000010903
Gene type
protein coding
RefSeq status
MODEL
Organism
Ailuropoda melanoleuca
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Ursidae; Ailuropoda
Also known as
LASS6
Orthologs
human mouse all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See CERS6 in Genome Data Viewer
Location:
chromosome: 2
Exon count:
11
Annotation release Status Assembly Chr Location
103 current ASM200744v2 (GCF_002007445.1) 2 NC_048219.1 (137535515..137847332)
102 previous assembly AilMel_1.0 (GCF_000004335.2) Unplaced Scaffold NW_003217435.1 (1674152..1987321, complement)

Chromosome 2 - NC_048219.1Genomic Context describing neighboring genes Neighboring gene serine/threonine kinase 39 Neighboring gene 60S ribosomal protein L23a-like Neighboring gene 60S ribosomal protein L4-like Neighboring gene nitric oxide synthase trafficking Neighboring gene SPC25 component of NDC80 kinetochore complex

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables sphingosine N-acyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in ceramide biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
ceramide synthase 6
Names
LAG1 homolog, ceramide synthase 6

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Ailuropoda melanoleuca Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM200744v2 Primary Assembly

Genomic

  1. NC_048219.1 Reference ASM200744v2 Primary Assembly

    Range
    137535515..137847332
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_019796708.2 → XP_019652267.1  ceramide synthase 6 isoform X1

    UniProtKB/TrEMBL
    G1LWK5, G1LWK8
    Related
    ENSAMEP00000011456.1, ENSAMET00000011943.2

  2. XM_002916510.4 → XP_002916556.1  ceramide synthase 6 isoform X2

    UniProtKB/TrEMBL
    A0A7N5KBY6, G1LWK8
    Related
    ENSAMEP00000037658.1, ENSAMET00000042560.1
    Conserved Domains (2) summary
    cd00086
    Location:80 → 120
    homeodomain; Homeodomain; DNA binding domains involved in the transcriptional regulation of key eukaryotic developmental processes; may bind to DNA as monomers or as homo- and/or heterodimers, in a sequence-specific manner.
    pfam03798
    Location:131 → 324
    TRAM_LAG1_CLN8; TLC domain
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.