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EBP EBP cholestenol delta-isomerase [ Ailuropoda melanoleuca (giant panda) ]

Gene ID: 100473435, updated on 8-Mar-2024

Summary

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Gene symbol
EBP
Gene description
EBP cholestenol delta-isomerase
Locus tag
PANDA_006184
See related
Ensembl:ENSAMEG00000012679
Gene type
protein coding
RefSeq status
MODEL
Organism
Ailuropoda melanoleuca
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Ursidae; Ailuropoda
Orthologs
human mouse all
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Genomic context

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See EBP in Genome Data Viewer
Location:
chromosome: X
Exon count:
5
Annotation release Status Assembly Chr Location
103 current ASM200744v2 (GCF_002007445.1) X NC_048238.1 (41144091..41149505)
102 previous assembly AilMel_1.0 (GCF_000004335.2) Unplaced Scaffold NW_003217513.1 (1184514..1191207, complement)

Chromosome X - NC_048238.1Genomic Context describing neighboring genes Neighboring gene FtsJ RNA 2'-O-methyltransferase 1 Neighboring gene porcupine O-acyltransferase Neighboring gene U4 spliceosomal RNA Neighboring gene TBC1 domain family member 25 Neighboring gene RNA binding motif protein 3

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. The sequence and de novo assembly of the giant panda genome. Li R, et al. Nature, 2010 Jan 21. PMID 20010809, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables C-8 sterol isomerase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables cholestenol delta-isomerase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables steroid delta-isomerase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cholesterol biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endoplasmic reticulum IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
3-beta-hydroxysteroid-Delta(8),Delta(7)-isomerase
Names
emopamil binding protein (sterol isomerase)

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Ailuropoda melanoleuca Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM200744v2 Primary Assembly

Genomic

  1. NC_048238.1 Reference ASM200744v2 Primary Assembly

    Range
    41144091..41149505
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_002917766.4 → XP_002917812.1  3-beta-hydroxysteroid-Delta(8),Delta(7)-isomerase

    See identical proteins and their annotated locations for XP_002917812.1

    UniProtKB/TrEMBL
    D2H7P2
    Related
    ENSAMEP00000013347.1, ENSAMET00000013905.2
    Conserved Domains (1) summary
    pfam05241
    Location:36 → 217
    EBP; Emopamil binding protein
Nucleotide Protein
Heading Accession and Version

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