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PLPP5 phospholipid phosphatase 5 [ Ailuropoda melanoleuca (giant panda) ]

Gene ID: 100473006, updated on 8-Mar-2024

Summary

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Gene symbol
PLPP5
Gene description
phospholipid phosphatase 5
Locus tag
PANDA_005492
See related
Ensembl:ENSAMEG00000011236
Gene type
protein coding
RefSeq status
MODEL
Organism
Ailuropoda melanoleuca
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Ursidae; Ailuropoda
Orthologs
human mouse all
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Genomic context

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See PLPP5 in Genome Data Viewer
Location:
chromosome: 18
Exon count:
8
Annotation release Status Assembly Chr Location
103 current ASM200744v2 (GCF_002007445.1) 18 NC_048235.1 (34055707..34067399)
102 previous assembly AilMel_1.0 (GCF_000004335.2) Unplaced Scaffold NW_003217475.1 (2160532..2165944, complement)

Chromosome 18 - NC_048235.1Genomic Context describing neighboring genes Neighboring gene U6 spliceosomal RNA Neighboring gene leucine zipper and EF-hand containing transmembrane protein 2 Neighboring gene nuclear receptor binding SET domain protein 3 Neighboring gene ragulator complex protein LAMTOR3-like Neighboring gene DDHD domain containing 2 Neighboring gene uncharacterized LOC117797101

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables phosphatidate phosphatase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in phospholipid metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
phospholipid phosphatase 5

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Ailuropoda melanoleuca Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM200744v2 Primary Assembly

Genomic

  1. NC_048235.1 Reference ASM200744v2 Primary Assembly

    Range
    34055707..34067399
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_034647711.1 → XP_034503602.1  phospholipid phosphatase 5 isoform X2

  2. XM_034647713.1 → XP_034503604.1  phospholipid phosphatase 5 isoform X4

  3. XM_034647715.1 → XP_034503606.1  phospholipid phosphatase 5 isoform X7

  4. XM_034647718.1 → XP_034503609.1  phospholipid phosphatase 5 isoform X11

  5. XM_034647710.1 → XP_034503601.1  phospholipid phosphatase 5 isoform X1

  6. XM_019797492.2 → XP_019653051.2  phospholipid phosphatase 5 isoform X5

  7. XM_034647712.1 → XP_034503603.1  phospholipid phosphatase 5 isoform X3

  8. XM_019797497.2 → XP_019653056.2  phospholipid phosphatase 5 isoform X8

  9. XM_034647714.1 → XP_034503605.1  phospholipid phosphatase 5 isoform X6

  10. XM_034647717.1 → XP_034503608.1  phospholipid phosphatase 5 isoform X10

  11. XM_034647716.1 → XP_034503607.1  phospholipid phosphatase 5 isoform X9

  12. XM_034647720.1 → XP_034503611.1  phospholipid phosphatase 5 isoform X13

    UniProtKB/TrEMBL
    G1LXN0

  13. XM_019797491.2 → XP_019653050.1  phospholipid phosphatase 5 isoform X12

  14. XM_019797494.2 → XP_019653053.1  phospholipid phosphatase 5 isoform X14

    UniProtKB/TrEMBL
    G1LXN0
    Related
    ENSAMEP00000011835.2, ENSAMET00000012336.2
Nucleotide Protein
Heading Accession and Version

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