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SLC26A2 solute carrier family 26 member 2 [ Ailuropoda melanoleuca (giant panda) ]

Gene ID: 100472754, updated on 18-Sep-2024

Summary

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Gene symbol
SLC26A2
Gene description
solute carrier family 26 member 2
Locus tag
PANDA_006600
See related
Ensembl:ENSAMEG00000005206
Gene type
protein coding
RefSeq status
MODEL
Organism
Ailuropoda melanoleuca
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Ursidae; Ailuropoda
Orthologs
human mouse all
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Genomic context

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See SLC26A2 in Genome Data Viewer
Location:
chromosome: 3
Exon count:
4
Annotation release Status Assembly Chr Location
103 current ASM200744v2 (GCF_002007445.1) 3 NC_048220.1 (106231487..106251194, complement)
102 previous assembly AilMel_1.0 (GCF_000004335.2) Unplaced Scaffold NW_003217530.1 (780301..797898, complement)

Chromosome 3 - NC_048220.1Genomic Context describing neighboring genes Neighboring gene HMG-box containing 3 Neighboring gene uncharacterized LOC117801576 Neighboring gene tigger transposable element derived 6 Neighboring gene phosphodiesterase 6A Neighboring gene PPARG coactivator 1 beta

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. The sequence and de novo assembly of the giant panda genome. Li R, et al. Nature, 2010 Jan 21. PMID 20010809, Free PMC Article
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables bicarbonate transmembrane transporter activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables chloride transmembrane transporter activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables oxalate transmembrane transporter activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables secondary active sulfate transmembrane transporter activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in transmembrane transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
sulfate transporter

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Ailuropoda melanoleuca Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM200744v2 Primary Assembly

Genomic

  1. NC_048220.1 Reference ASM200744v2 Primary Assembly

    Range
    106231487..106251194 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_034656886.1 → XP_034512777.1  sulfate transporter isoform X2

  2. XM_034656885.1 → XP_034512776.1  sulfate transporter isoform X1

    UniProtKB/TrEMBL
    D2H8M6, G1LF16

  3. XM_011223544.3 → XP_011221846.1  sulfate transporter isoform X1

    See identical proteins and their annotated locations for XP_011221846.1

    UniProtKB/TrEMBL
    D2H8M6, G1LF16
    Related
    ENSAMEP00000005503.2, ENSAMET00000005729.2
    Conserved Domains (2) summary
    cd06844
    Location:573 → 710
    STAS; Sulphate Transporter and Anti-Sigma factor antagonist domain found in the C-terminal region of sulphate transporters as well as in bacterial and archaeal proteins involved in the regulation of sigma factors
    TIGR00815
    Location:96 → 718
    sulP; high affinity sulphate transporter 1
Nucleotide Protein
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