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PGM5 phosphoglucomutase 5 [ Ailuropoda melanoleuca (giant panda) ]

Gene ID: 100472052, updated on 8-Mar-2024

Summary

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Gene symbol
PGM5
Gene description
phosphoglucomutase 5
Locus tag
PANDA_017818
See related
Ensembl:ENSAMEG00000008064
Gene type
protein coding
RefSeq status
MODEL
Organism
Ailuropoda melanoleuca
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Ursidae; Ailuropoda
Orthologs
human mouse all
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Genomic context

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See PGM5 in Genome Data Viewer
Location:
chromosome: 17
Exon count:
11
Annotation release Status Assembly Chr Location
103 current ASM200744v2 (GCF_002007445.1) 17 NC_048234.1 (23789150..23977517)
102 previous assembly AilMel_1.0 (GCF_000004335.2) Unplaced Scaffold NW_003218663.1 (13418..179275)

Chromosome 17 - NC_048234.1Genomic Context describing neighboring genes Neighboring gene Zn regulated GTPase metalloprotein activator 1A Neighboring gene forkhead box protein D4-like 1 Neighboring gene U4 spliceosomal RNA Neighboring gene uncharacterized LOC117796923 Neighboring gene transmembrane protein 252 Neighboring gene uncharacterized LOC117796943

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. The sequence and de novo assembly of the giant panda genome. Li R, et al. Nature, 2010 Jan 21. PMID 20010809, Free PMC Article
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables magnesium ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables phosphoglucomutase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in carbohydrate metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in myofibril assembly IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in striated muscle tissue development IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in adherens junction IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in cell-substrate junction IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in cytosol IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in sarcolemma IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
phosphoglucomutase-like protein 5

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Ailuropoda melanoleuca Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM200744v2 Primary Assembly

Genomic

  1. NC_048234.1 Reference ASM200744v2 Primary Assembly

    Range
    23789150..23977517
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_034646746.1 → XP_034502637.1  phosphoglucomutase-like protein 5

    UniProtKB/TrEMBL
    G1LN64
    Related
    ENSAMEP00000008490.2, ENSAMET00000008849.2
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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