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OLR1 oxidized low density lipoprotein receptor 1 [ Ailuropoda melanoleuca (giant panda) ]

Gene ID: 100471706, updated on 8-Mar-2024

Summary

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Gene symbol
OLR1
Gene description
oxidized low density lipoprotein receptor 1
Locus tag
PANDA_014851
See related
Ensembl:ENSAMEG00000031192
Gene type
protein coding
RefSeq status
MODEL
Organism
Ailuropoda melanoleuca
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Ursidae; Ailuropoda
Orthologs
human mouse all
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Genomic context

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See OLR1 in Genome Data Viewer
Location:
chromosome: 16
Exon count:
10
Annotation release Status Assembly Chr Location
103 current ASM200744v2 (GCF_002007445.1) 16 NC_048233.1 (9887025..9919686, complement)
102 previous assembly AilMel_1.0 (GCF_000004335.2) Unplaced Scaffold NW_003218213.1 (45406..54435)

Chromosome 16 - NC_048233.1Genomic Context describing neighboring genes Neighboring gene C-type lectin domain family 1 member A Neighboring gene C-type lectin domain containing 9A Neighboring gene C-type lectin domain containing 7A Neighboring gene transmembrane protein 52B Neighboring gene GABA type A receptor associated protein like 1 Neighboring gene uncharacterized LOC117796693

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables low-density lipoprotein particle receptor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cell death IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in inflammatory response IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in leukocyte cell-cell adhesion IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in lipoprotein metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of receptor complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
oxidized low-density lipoprotein receptor 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Ailuropoda melanoleuca Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM200744v2 Primary Assembly

Genomic

  1. NC_048233.1 Reference ASM200744v2 Primary Assembly

    Range
    9887025..9919686 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_034645550.1 → XP_034501441.1  oxidized low-density lipoprotein receptor 1 isoform X2

  2. XM_034645551.1 → XP_034501442.1  oxidized low-density lipoprotein receptor 1 isoform X4

  3. XM_034645549.1 → XP_034501440.1  oxidized low-density lipoprotein receptor 1 isoform X1

  4. XM_034645548.1 → XP_034501439.1  oxidized low-density lipoprotein receptor 1 isoform X1

  5. XM_002925319.3 → XP_002925365.1  oxidized low-density lipoprotein receptor 1 isoform X3

    UniProtKB/TrEMBL
    A0A7N5KET8
    Related
    ENSAMEP00000039116.1, ENSAMET00000039272.1
    Conserved Domains (1) summary
    cd03593
    Location:148 → 270
    CLECT_NK_receptors_like; C-type lectin-like domain (CTLD) of the type found in natural killer cell receptors (NKRs)
Nucleotide Protein
Heading Accession and Version

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