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TKFC triokinase and FMN cyclase [ Ailuropoda melanoleuca (giant panda) ]

Gene ID: 100471465, updated on 8-Mar-2024

Summary

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Gene symbol
TKFC
Gene description
triokinase and FMN cyclase
Locus tag
PANDA_015889
See related
Ensembl:ENSAMEG00000016560
Gene type
protein coding
RefSeq status
MODEL
Organism
Ailuropoda melanoleuca
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Ursidae; Ailuropoda
Orthologs
human mouse all
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Genomic context

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See TKFC in Genome Data Viewer
Location:
chromosome: 16
Exon count:
20
Annotation release Status Assembly Chr Location
103 current ASM200744v2 (GCF_002007445.1) 16 NC_048233.1 (81014225..81027579)
102 previous assembly AilMel_1.0 (GCF_000004335.2) Unplaced Scaffold NW_003218348.1 (34185..49044)

Chromosome 16 - NC_048233.1Genomic Context describing neighboring genes Neighboring gene pepsin A Neighboring gene von Willebrand factor C and EGF domains Neighboring gene damage specific DNA binding protein 1 Neighboring gene cytochrome b ascorbate-dependent protein 3 Neighboring gene transmembrane protein 138

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables glycerone kinase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in glycerol catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytosol IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
triokinase/FMN cyclase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Ailuropoda melanoleuca Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM200744v2 Primary Assembly

Genomic

  1. NC_048233.1 Reference ASM200744v2 Primary Assembly

    Range
    81014225..81027579
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_019806959.2 → XP_019662518.1  triokinase/FMN cyclase isoform X1

    UniProtKB/TrEMBL
    D2HUE6, G1MDS9

  2. XM_011233587.3 → XP_011231889.1  triokinase/FMN cyclase isoform X1

    See identical proteins and their annotated locations for XP_011231889.1

    UniProtKB/TrEMBL
    D2HUE6, G1MDS9
    Conserved Domains (3) summary
    TIGR02361
    Location:4 → 570
    dak_ATP; dihydroxyacetone kinase, ATP-dependent
    pfam02733
    Location:19 → 335
    Dak1; Dak1 domain
    pfam02734
    Location:398 → 571
    Dak2; DAK2 domain

  3. XM_034646003.1 → XP_034501894.1  triokinase/FMN cyclase isoform X2

    UniProtKB/TrEMBL
    D2HUE6

  4. XM_034646004.1 → XP_034501895.1  triokinase/FMN cyclase isoform X3

    UniProtKB/TrEMBL
    D2HUE6

  5. XM_034646002.1 → XP_034501893.1  triokinase/FMN cyclase isoform X1

    UniProtKB/TrEMBL
    D2HUE6, G1MDS9
    Related
    ENSAMEP00000017507.2, ENSAMET00000018219.2

  6. XM_019806960.2 → XP_019662519.1  triokinase/FMN cyclase isoform X1

    UniProtKB/TrEMBL
    D2HUE6, G1MDS9
Nucleotide Protein
Heading Accession and Version

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