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PLA2G4F phospholipase A2 group IVF [ Ailuropoda melanoleuca (giant panda) ]

Gene ID: 100469987, updated on 8-Mar-2024

Summary

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Gene symbol
PLA2G4F
Gene description
phospholipase A2 group IVF
Locus tag
PANDA_001040
See related
Ensembl:ENSAMEG00000016201
Gene type
protein coding
RefSeq status
MODEL
Organism
Ailuropoda melanoleuca
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Ursidae; Ailuropoda
Orthologs
human mouse all
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Genomic context

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See PLA2G4F in Genome Data Viewer
Location:
chromosome: 5
Exon count:
21
Annotation release Status Assembly Chr Location
103 current ASM200744v2 (GCF_002007445.1) 5 NC_048222.1 (62721392..62739036)
102 previous assembly AilMel_1.0 (GCF_000004335.2) Unplaced Scaffold NW_003217306.1 (2308209..2325112)

Chromosome 5 - NC_048222.1Genomic Context describing neighboring genes Neighboring gene U6 spliceosomal RNA Neighboring gene transmembrane protein 87A Neighboring gene VPS39 subunit of HOPS complex Neighboring gene phospholipase A2 group IVD Neighboring gene phospholipase A2 group IVE

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables calcium ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables calcium-dependent phospholipase A2 activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables calcium-dependent phospholipid binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in glycerophospholipid catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytosol IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
cytosolic phospholipase A2 zeta

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Ailuropoda melanoleuca Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM200744v2 Primary Assembly

Genomic

  1. NC_048222.1 Reference ASM200744v2 Primary Assembly

    Range
    62721392..62739036
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_034661102.1 → XP_034516993.1  cytosolic phospholipase A2 zeta isoform X2

    UniProtKB/TrEMBL
    D2GW76

  2. XM_002913248.3 → XP_002913294.1  cytosolic phospholipase A2 zeta isoform X1

    UniProtKB/TrEMBL
    D2GW76, G1MCX9
    Related
    ENSAMEP00000017207.2, ENSAMET00000017912.2
    Conserved Domains (3) summary
    cd07201
    Location:303 → 843
    cPLA2_Grp-IVB-IVD-IVE-IVF; Group IVB, IVD, IVE, and IVF cytosolic phospholipase A2; catalytic domain; Ca-dependent
    cd04036
    Location:46 → 162
    C2_cPLA2; C2 domain present in cytosolic PhosphoLipase A2 (cPLA2)
    smart00022
    Location:309 → 791
    PLAc; Cytoplasmic phospholipase A2, catalytic subunit

  3. XM_019801963.2 → XP_019657522.1  cytosolic phospholipase A2 zeta isoform X4

    UniProtKB/TrEMBL
    D2GW76

  4. XM_034661103.1 → XP_034516994.1  cytosolic phospholipase A2 zeta isoform X3

    UniProtKB/TrEMBL
    D2GW76
Nucleotide Protein
Heading Accession and Version

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