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TOP2B DNA topoisomerase II beta [ Ailuropoda melanoleuca (giant panda) ]

Gene ID: 100469273, updated on 8-Mar-2024

Summary

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Gene symbol
TOP2B
Gene description
DNA topoisomerase II beta
Locus tag
PANDA_016140
See related
Ensembl:ENSAMEG00000000618
Gene type
protein coding
RefSeq status
MODEL
Organism
Ailuropoda melanoleuca
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Ursidae; Ailuropoda
Orthologs
human mouse all
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Genomic context

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See TOP2B in Genome Data Viewer
Location:
chromosome: 6
Exon count:
35
Annotation release Status Assembly Chr Location
103 current ASM200744v2 (GCF_002007445.1) 6 NC_048223.1 (26949732..26997246, complement)
102 previous assembly AilMel_1.0 (GCF_000004335.2) Unplaced Scaffold NW_003218383.1 (271552..318025)

Chromosome 6 - NC_048223.1Genomic Context describing neighboring genes Neighboring gene small nuclear ribonucleoprotein G-like Neighboring gene retinoic acid receptor beta Neighboring gene uncharacterized LOC109490730 Neighboring gene uncharacterized LOC117802642 Neighboring gene N-glycanase 1 Neighboring gene 3-oxoacyl-ACP synthase, mitochondrial

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in DNA topological change IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in resolution of meiotic recombination intermediates IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in sister chromatid segregation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
DNA topoisomerase 2-beta
Names
topoisomerase (DNA) II beta

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Ailuropoda melanoleuca Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM200744v2 Primary Assembly

Genomic

  1. NC_048223.1 Reference ASM200744v2 Primary Assembly

    Range
    26949732..26997246 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_034662077.1 → XP_034517968.1  DNA topoisomerase 2-beta

    UniProtKB/TrEMBL
    D2HUZ8, G1L1L3
    Related
    ENSAMEP00000000766.2, ENSAMET00000000792.2
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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