U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

SELP selectin P [ Ailuropoda melanoleuca (giant panda) ]

Gene ID: 100467827, updated on 8-Mar-2024

Summary

Go to the top of the page Help
Gene symbol
SELP
Gene description
selectin P
Locus tag
PANDA_007107
See related
Ensembl:ENSAMEG00000011331
Gene type
protein coding
RefSeq status
MODEL
Organism
Ailuropoda melanoleuca
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Ursidae; Ailuropoda
Orthologs
human mouse all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See SELP in Genome Data Viewer
Location:
chromosome: 8
Exon count:
20
Annotation release Status Assembly Chr Location
103 current ASM200744v2 (GCF_002007445.1) 8 NC_048225.1 (74062168..74104806, complement)
102 previous assembly AilMel_1.0 (GCF_000004335.2) Unplaced Scaffold NW_003217559.1 (1166916..1209188)

Chromosome 8 - NC_048225.1Genomic Context describing neighboring genes Neighboring gene small integral membrane protein 15-like Neighboring gene coagulation factor V Neighboring gene uncharacterized LOC117803406 Neighboring gene selectin L

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables oligosaccharide binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables sialic acid binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in heterophilic cell-cell adhesion via plasma membrane cell adhesion molecules IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in leukocyte tethering or rolling IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in response to cytokine IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in external side of plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in extracellular space IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
P-selectin

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Ailuropoda melanoleuca Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM200744v2 Primary Assembly

Genomic

  1. NC_048225.1 Reference ASM200744v2 Primary Assembly

    Range
    74062168..74104806 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_011224105.3 → XP_011222407.1  P-selectin isoform X4

    See identical proteins and their annotated locations for XP_011222407.1

    UniProtKB/TrEMBL
    A0A7N5JJL0, G1LY33
    Related
    ENSAMEP00000026348.1, ENSAMET00000048756.1
    Conserved Domains (4) summary
    cd00033
    Location:572 → 630
    CCP; Complement control protein (CCP) modules (aka short consensus repeats SCRs or SUSHI repeats) have been identified in several proteins of the complement system
    cd03592
    Location:42 → 160
    CLECT_selectins_like; C-type lectin-like domain (CTLD) of the type found in the type 1 transmembrane proteins: P(platlet)-, E(endothelial)-, and L(leukocyte)- selectins (sels)
    PHA02927
    Location:505 → 762
    PHA02927; secreted complement-binding protein; Provisional
    cd00054
    Location:168 → 195
    EGF_CA; Calcium-binding EGF-like domain, present in a large number of membrane-bound and extracellular (mostly animal) proteins. Many of these proteins require calcium for their biological function and calcium-binding sites have been found to be located at the ...

  2. XM_011224107.3 → XP_011222409.1  P-selectin isoform X6

    UniProtKB/TrEMBL
    A0A7N5JK86
    Related
    ENSAMEP00000026639.1, ENSAMET00000038912.1
    Conserved Domains (4) summary
    cd00033
    Location:567 → 625
    CCP; Complement control protein (CCP) modules (aka short consensus repeats SCRs or SUSHI repeats) have been identified in several proteins of the complement system
    cd03592
    Location:99 → 217
    CLECT_selectins_like; C-type lectin-like domain (CTLD) of the type found in the type 1 transmembrane proteins: P(platlet)-, E(endothelial)-, and L(leukocyte)- selectins (sels)
    PHA02927
    Location:500 → 757
    PHA02927; secreted complement-binding protein; Provisional
    cd00054
    Location:225 → 252
    EGF_CA; Calcium-binding EGF-like domain, present in a large number of membrane-bound and extracellular (mostly animal) proteins. Many of these proteins require calcium for their biological function and calcium-binding sites have been found to be located at the ...

  3. XM_002918569.4 → XP_002918615.2  P-selectin isoform X3

    UniProtKB/TrEMBL
    G1LY33
    Conserved Domains (4) summary
    cd00033
    Location:629 → 687
    CCP; Complement control protein (CCP) modules (aka short consensus repeats SCRs or SUSHI repeats) have been identified in several proteins of the complement system
    cd03592
    Location:99 → 217
    CLECT_selectins_like; C-type lectin-like domain (CTLD) of the type found in the type 1 transmembrane proteins: P(platlet)-, E(endothelial)-, and L(leukocyte)- selectins (sels)
    PHA02927
    Location:562 → 818
    PHA02927; secreted complement-binding protein; Provisional
    cd00054
    Location:225 → 252
    EGF_CA; Calcium-binding EGF-like domain, present in a large number of membrane-bound and extracellular (mostly animal) proteins. Many of these proteins require calcium for their biological function and calcium-binding sites have been found to be located at the ...

  4. XM_034666706.1 → XP_034522597.1  P-selectin isoform X2

    UniProtKB/TrEMBL
    G1LY33

  5. XM_011224104.3 → XP_011222406.1  P-selectin isoform X1

    UniProtKB/TrEMBL
    G1LY33
    Conserved Domains (4) summary
    cd00033
    Location:629 → 687
    CCP; Complement control protein (CCP) modules (aka short consensus repeats SCRs or SUSHI repeats) have been identified in several proteins of the complement system
    cd03592
    Location:99 → 217
    CLECT_selectins_like; C-type lectin-like domain (CTLD) of the type found in the type 1 transmembrane proteins: P(platlet)-, E(endothelial)-, and L(leukocyte)- selectins (sels)
    PHA02927
    Location:562 → 819
    PHA02927; secreted complement-binding protein; Provisional
    cd00054
    Location:225 → 252
    EGF_CA; Calcium-binding EGF-like domain, present in a large number of membrane-bound and extracellular (mostly animal) proteins. Many of these proteins require calcium for their biological function and calcium-binding sites have been found to be located at the ...

  6. XM_034666707.1 → XP_034522598.1  P-selectin isoform X5

    UniProtKB/TrEMBL
    A0A7N5JJL0, G1LY33
    Related
    ENSAMEP00000011989.2, ENSAMET00000012495.2
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.