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PFKP phosphofructokinase, platelet [ Ailuropoda melanoleuca (giant panda) ]

Gene ID: 100467584, updated on 8-Mar-2024

Summary

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Gene symbol
PFKP
Gene description
phosphofructokinase, platelet
Locus tag
PANDA_010135
Gene type
protein coding
RefSeq status
MODEL
Organism
Ailuropoda melanoleuca
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Ursidae; Ailuropoda
Orthologs
human mouse all
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Genomic context

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See PFKP in Genome Data Viewer
Location:
chromosome: 15
Exon count:
21
Annotation release Status Assembly Chr Location
103 current ASM200744v2 (GCF_002007445.1) 15 NC_048232.1 (2728092..2804391)
102 previous assembly AilMel_1.0 (GCF_000004335.2) Unplaced Scaffold NW_003217763.1 (616610..668947)

Chromosome 15 - NC_048232.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC109490542 Neighboring gene uncharacterized LOC117796383 Neighboring gene pitrilysin metallopeptidase 1 Neighboring gene uncharacterized LOC117796457

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. The sequence and de novo assembly of the giant panda genome. Li R, et al. Nature, 2010 Jan 21. PMID 20010809, Free PMC Article
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables 6-phosphofructokinase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables AMP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables fructose-6-phosphate binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables identical protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables monosaccharide binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in canonical glycolysis IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in fructose 1,6-bisphosphate metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in fructose 6-phosphate metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of 6-phosphofructokinase complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
LOW QUALITY PROTEIN: ATP-dependent 6-phosphofructokinase, platelet type

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Ailuropoda melanoleuca Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM200744v2 Primary Assembly

Genomic

  1. NC_048232.1 Reference ASM200744v2 Primary Assembly

    Range
    2728092..2804391
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_034644089.1 → XP_034499980.1  LOW QUALITY PROTEIN: ATP-dependent 6-phosphofructokinase, platelet type

    UniProtKB/TrEMBL
    G1L9E3
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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