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CLEC17A C-type lectin domain containing 17A [ Ailuropoda melanoleuca (giant panda) ]

Gene ID: 100467531, updated on 8-Mar-2024

Summary

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Gene symbol
CLEC17A
Gene description
C-type lectin domain containing 17A
Locus tag
PANDA_020842
See related
Ensembl:ENSAMEG00000011477
Gene type
protein coding
RefSeq status
MODEL
Organism
Ailuropoda melanoleuca
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Ursidae; Ailuropoda
Orthologs
human all
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Genomic context

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See CLEC17A in Genome Data Viewer
Location:
chromosome: 4
Exon count:
16
Annotation release Status Assembly Chr Location
103 current ASM200744v2 (GCF_002007445.1) 4 NC_048221.1 (9966735..9979728)
102 previous assembly AilMel_1.0 (GCF_000004335.2) Unplaced Scaffold NW_003219582.1 (37953..48295)

Chromosome 4 - NC_048221.1Genomic Context describing neighboring genes Neighboring gene very-long-chain enoyl-CoA reductase-like Neighboring gene NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 7-like Neighboring gene adhesion G protein-coupled receptor E3 Neighboring gene transfer RNA lysine (anticodon CUU) Neighboring gene zinc finger protein 333-like Neighboring gene zinc finger protein 333

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables signaling receptor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
C-type lectin domain family 17, member A
Names
C-type lectin domain family 17 member A

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Ailuropoda melanoleuca Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM200744v2 Primary Assembly

Genomic

  1. NC_048221.1 Reference ASM200744v2 Primary Assembly

    Range
    9966735..9979728
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_034657907.1 → XP_034513798.1  C-type lectin domain family 17, member A isoform X2

    UniProtKB/TrEMBL
    A0A7N5JU19

  2. XM_034657910.1 → XP_034513801.1  C-type lectin domain family 17, member A isoform X7

    UniProtKB/TrEMBL
    A0A7N5JU19
    Related
    ENSAMEP00000028377.1, ENSAMET00000040583.1

  3. XM_034657913.1 → XP_034513804.1  C-type lectin domain family 17, member A isoform X9

    UniProtKB/TrEMBL
    A0A7N5JU19

  4. XM_034657909.1 → XP_034513800.1  C-type lectin domain family 17, member A isoform X6

    UniProtKB/TrEMBL
    A0A7N5JU19

  5. XM_034657908.1 → XP_034513799.1  C-type lectin domain family 17, member A isoform X4

  6. XM_019793159.2 → XP_019648718.2  C-type lectin domain family 17, member A isoform X3

    UniProtKB/TrEMBL
    A0A7N5JU19

  7. XM_019793158.2 → XP_019648717.2  C-type lectin domain family 17, member A isoform X1

    UniProtKB/TrEMBL
    A0A7N5JU19

  8. XM_019793160.2 → XP_019648719.1  C-type lectin domain family 17, member A isoform X5

    UniProtKB/TrEMBL
    A0A7N5JU19

  9. XM_034657912.1 → XP_034513803.1  C-type lectin domain family 17, member A isoform X8

    UniProtKB/TrEMBL
    A0A7N5JU19
Nucleotide Protein
Heading Accession and Version

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