U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

LARP7 La ribonucleoprotein 7, transcriptional regulator [ Ailuropoda melanoleuca (giant panda) ]

Gene ID: 100467107, updated on 8-Mar-2024

Summary

Go to the top of the page Help
Gene symbol
LARP7
Gene description
La ribonucleoprotein 7, transcriptional regulator
Locus tag
PANDA_015632
See related
Ensembl:ENSAMEG00000015642
Gene type
protein coding
RefSeq status
MODEL
Organism
Ailuropoda melanoleuca
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Ursidae; Ailuropoda
Orthologs
human mouse all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See LARP7 in Genome Data Viewer
Location:
chromosome: 11
Exon count:
14
Annotation release Status Assembly Chr Location
103 current ASM200744v2 (GCF_002007445.1) 11 NC_048228.1 (19765724..19784851, complement)
102 previous assembly AilMel_1.0 (GCF_000004335.2) Unplaced Scaffold NW_003218321.1 (145506..164674)

Chromosome 11 - NC_048228.1Genomic Context describing neighboring genes Neighboring gene ankyrin 2 Neighboring gene U6atac minor spliceosomal RNA Neighboring gene uncharacterized LOC117804484 Neighboring gene 60S ribosomal protein L5-like Neighboring gene zinc finger GRF-type containing 1 Neighboring gene uncharacterized LOC117804433

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. The sequence and de novo assembly of the giant panda genome. Li R, et al. Nature, 2010 Jan 21. PMID 20010809, Free PMC Article
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables mRNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in RNA processing IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
la-related protein 7
Names
La ribonucleoprotein domain family member 7

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Ailuropoda melanoleuca Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM200744v2 Primary Assembly

Genomic

  1. NC_048228.1 Reference ASM200744v2 Primary Assembly

    Range
    19765724..19784851 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_019806697.2 → XP_019662256.1  la-related protein 7 isoform X2

    UniProtKB/TrEMBL
    G1MAY5

  2. XM_002925992.4 → XP_002926038.1  la-related protein 7 isoform X1

    See identical proteins and their annotated locations for XP_002926038.1

    UniProtKB/TrEMBL
    G1MAY5
    Conserved Domains (3) summary
    cd08032
    Location:30 → 111
    LARP_7; La RNA-binding domain of La-related protein 7
    cd12290
    Location:126 → 205
    RRM1_LARP7; RNA recognition motif 1 in La-related protein 7 (LARP7) and similar proteins
    pfam08777
    Location:452 → 550
    RRM_3; RNA binding motif

  3. XM_011233322.3 → XP_011231624.1  la-related protein 7 isoform X1

    See identical proteins and their annotated locations for XP_011231624.1

    UniProtKB/TrEMBL
    G1MAY5
    Related
    ENSAMEP00000016510.2, ENSAMET00000017191.2
    Conserved Domains (3) summary
    cd08032
    Location:30 → 111
    LARP_7; La RNA-binding domain of La-related protein 7
    cd12290
    Location:126 → 205
    RRM1_LARP7; RNA recognition motif 1 in La-related protein 7 (LARP7) and similar proteins
    pfam08777
    Location:452 → 550
    RRM_3; RNA binding motif
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.