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NSDHL NAD(P) dependent steroid dehydrogenase-like [ Ailuropoda melanoleuca (giant panda) ]

Gene ID: 100466780, updated on 19-Jun-2024

Summary

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Gene symbol
NSDHL
Gene description
NAD(P) dependent steroid dehydrogenase-like
Locus tag
PANDA_020481
See related
Ensembl:ENSAMEG00000000343
Gene type
protein coding
RefSeq status
MODEL
Organism
Ailuropoda melanoleuca
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Ursidae; Ailuropoda
Orthologs
human mouse all
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Genomic context

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See NSDHL in Genome Data Viewer
Location:
chromosome: X
Exon count:
11
Annotation release Status Assembly Chr Location
103 current ASM200744v2 (GCF_002007445.1) X NC_048238.1 (110427600..110458285)
102 previous assembly AilMel_1.0 (GCF_000004335.2) Unplaced Scaffold NW_003219417.1 (149320..179973, complement)

Chromosome X - NC_048238.1Genomic Context describing neighboring genes Neighboring gene small nucleolar RNA SNORA62/SNORA6 family Neighboring gene centrin 2 Neighboring gene zinc finger protein 185 with LIM domain Neighboring gene PNMA family member 6A

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. The sequence and de novo assembly of the giant panda genome. Li R, et al. Nature, 2010 Jan 21. PMID 20010809, Free PMC Article
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables 3-beta-hydroxy-delta5-steroid dehydrogenase (NAD+) activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in steroid biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
sterol-4-alpha-carboxylate 3-dehydrogenase, decarboxylating

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Ailuropoda melanoleuca Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM200744v2 Primary Assembly

Genomic

  1. NC_048238.1 Reference ASM200744v2 Primary Assembly

    Range
    110427600..110458285
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_019792892.2 → XP_019648451.1  sterol-4-alpha-carboxylate 3-dehydrogenase, decarboxylating isoform X1

    UniProtKB/TrEMBL
    D2I4G4, G1L0G9

  2. XM_011216804.3 → XP_011215106.1  sterol-4-alpha-carboxylate 3-dehydrogenase, decarboxylating isoform X1

    See identical proteins and their annotated locations for XP_011215106.1

    UniProtKB/TrEMBL
    D2I4G4, G1L0G9
    Conserved Domains (2) summary
    pfam01073
    Location:30 → 280
    3Beta_HSD; 3-beta hydroxysteroid dehydrogenase/isomerase family
    cl21454
    Location:28 → 354
    NADB_Rossmann; Rossmann-fold NAD(P)(+)-binding proteins

  3. XM_002930084.4 → XP_002930130.1  sterol-4-alpha-carboxylate 3-dehydrogenase, decarboxylating isoform X1

    See identical proteins and their annotated locations for XP_002930130.1

    UniProtKB/TrEMBL
    D2I4G4, G1L0G9
    Related
    ENSAMEP00000035607.1, ENSAMET00000044280.1
    Conserved Domains (2) summary
    pfam01073
    Location:30 → 280
    3Beta_HSD; 3-beta hydroxysteroid dehydrogenase/isomerase family
    cl21454
    Location:28 → 354
    NADB_Rossmann; Rossmann-fold NAD(P)(+)-binding proteins

  4. XM_011216808.3 → XP_011215110.1  sterol-4-alpha-carboxylate 3-dehydrogenase, decarboxylating isoform X2

    UniProtKB/TrEMBL
    D2I4G4
    Conserved Domains (2) summary
    pfam01073
    Location:1 → 240
    3Beta_HSD; 3-beta hydroxysteroid dehydrogenase/isomerase family
    cl21454
    Location:1 → 314
    NADB_Rossmann; Rossmann-fold NAD(P)(+)-binding proteins

  5. XM_034648955.1 → XP_034504846.1  sterol-4-alpha-carboxylate 3-dehydrogenase, decarboxylating isoform X2

    UniProtKB/TrEMBL
    D2I4G4

  6. XM_034648954.1 → XP_034504845.1  sterol-4-alpha-carboxylate 3-dehydrogenase, decarboxylating isoform X1

    UniProtKB/TrEMBL
    D2I4G4, G1L0G9

  7. XM_034648953.1 → XP_034504844.1  sterol-4-alpha-carboxylate 3-dehydrogenase, decarboxylating isoform X1

    UniProtKB/TrEMBL
    D2I4G4, G1L0G9
    Related
    ENSAMEP00000000371.2, ENSAMET00000000385.2
Nucleotide Protein
Heading Accession and Version

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