U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

GCNT4 glucosaminyl (N-acetyl) transferase 4 [ Ailuropoda melanoleuca (giant panda) ]

Gene ID: 100466724, updated on 8-Mar-2024

Summary

Go to the top of the page Help
Gene symbol
GCNT4
Gene description
glucosaminyl (N-acetyl) transferase 4
Locus tag
PANDA_005462
See related
Ensembl:ENSAMEG00000029130
Gene type
protein coding
RefSeq status
MODEL
Organism
Ailuropoda melanoleuca
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Ursidae; Ailuropoda
Orthologs
human mouse all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See GCNT4 in Genome Data Viewer
Location:
chromosome: 3
Exon count:
4
Annotation release Status Assembly Chr Location
103 current ASM200744v2 (GCF_002007445.1) 3 NC_048220.1 (50653024..50681054, complement)
102 previous assembly AilMel_1.0 (GCF_000004335.2) Unplaced Scaffold NW_003217474.1 (1146181..1171117, complement)

Chromosome 3 - NC_048220.1Genomic Context describing neighboring genes Neighboring gene family with sequence similarity 169 member A Neighboring gene 60S ribosomal protein L10a-like Neighboring gene ankyrin repeat domain 31 Neighboring gene metallothionein-2E-like Neighboring gene U6 spliceosomal RNA

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. The sequence and de novo assembly of the giant panda genome. Li R, et al. Nature, 2010 Jan 21. PMID 20010809, Free PMC Article
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables acetylglucosaminyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
beta-1,3-galactosyl-O-glycosyl-glycoprotein beta-1,6-N-acetylglucosaminyltransferase 4
Names
glucosaminyl (N-acetyl) transferase 4, core 2

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Ailuropoda melanoleuca Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM200744v2 Primary Assembly

Genomic

  1. NC_048220.1 Reference ASM200744v2 Primary Assembly

    Range
    50653024..50681054 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_034656367.1 → XP_034512258.1  beta-1,3-galactosyl-O-glycosyl-glycoprotein beta-1,6-N-acetylglucosaminyltransferase 4 isoform X2

    UniProtKB/TrEMBL
    D2H684

  2. XM_002917218.4 → XP_002917264.2  beta-1,3-galactosyl-O-glycosyl-glycoprotein beta-1,6-N-acetylglucosaminyltransferase 4 isoform X1

    UniProtKB/TrEMBL
    A0A7N5JDZ1
    Related
    ENSAMEP00000023962.1, ENSAMET00000041772.1

  3. XM_034656366.1 → XP_034512257.1  beta-1,3-galactosyl-O-glycosyl-glycoprotein beta-1,6-N-acetylglucosaminyltransferase 4 isoform X2

    UniProtKB/TrEMBL
    D2H684
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.