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PTGIS prostaglandin I2 synthase [ Ailuropoda melanoleuca (giant panda) ]

Gene ID: 100466540, updated on 8-Mar-2024

Summary

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Gene symbol
PTGIS
Gene description
prostaglandin I2 synthase
Locus tag
PANDA_000805
See related
Ensembl:ENSAMEG00000013578
Gene type
protein coding
RefSeq status
MODEL
Organism
Ailuropoda melanoleuca
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Ursidae; Ailuropoda
Annotation information
Annotation category: partial on reference assembly
Orthologs
human mouse all
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Genomic context

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See PTGIS in Genome Data Viewer
Location:
chromosome: 13
Exon count:
9
Annotation release Status Assembly Chr Location
103 current ASM200744v2 (GCF_002007445.1) 13 NC_048230.1 (56868319..56903278)
102 previous assembly AilMel_1.0 (GCF_000004335.2) Unplaced Scaffold NW_003217301.1 (3952637..4009717)

Chromosome 13 - NC_048230.1Genomic Context describing neighboring genes Neighboring gene solute carrier family 9 member A8 Neighboring gene beta-1,4-galactosyltransferase 5 Neighboring gene potassium voltage-gated channel subfamily B member 1 Neighboring gene uncharacterized LOC117795799

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables heme binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables iron ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables monooxygenase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables prostaglandin-I synthase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in prostaglandin biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
prostacyclin synthase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Ailuropoda melanoleuca Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM200744v2 Primary Assembly

Genomic

  1. NC_048230.1 Reference ASM200744v2 Primary Assembly

    Range
    56868319..56903278
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_034641581.1 → XP_034497472.1  prostacyclin synthase

    UniProtKB/TrEMBL
    D2GVP2
    Related
    ENSAMEP00000014301.2, ENSAMET00000014901.2
Nucleotide Protein
Heading Accession and Version

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