U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

B4GALNT1 beta-1,4-N-acetyl-galactosaminyltransferase 1 [ Ailuropoda melanoleuca (giant panda) ]

Gene ID: 100466312, updated on 8-Mar-2024

Summary

Go to the top of the page Help
Gene symbol
B4GALNT1
Gene description
beta-1,4-N-acetyl-galactosaminyltransferase 1
Locus tag
PANDA_004131
See related
Ensembl:ENSAMEG00000005224
Gene type
protein coding
RefSeq status
MODEL
Organism
Ailuropoda melanoleuca
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Ursidae; Ailuropoda
Orthologs
human mouse all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See B4GALNT1 in Genome Data Viewer
Location:
chromosome: 15
Exon count:
12
Annotation release Status Assembly Chr Location
103 current ASM200744v2 (GCF_002007445.1) 15 NC_048232.1 (34653512..34664954, complement)
102 previous assembly AilMel_1.0 (GCF_000004335.2) Unplaced Scaffold NW_003217407.1 (1414451..1420753, complement)

Chromosome 15 - NC_048232.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC105236166 Neighboring gene Rho guanine nucleotide exchange factor 25 Neighboring gene Solute carrier family 26 member 10 Neighboring gene transfer RNA serine (anticodon GCU) Neighboring gene OS9 endoplasmic reticulum lectin Neighboring gene ArfGAP with GTPase domain, ankyrin repeat and PH domain 2

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables hexosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in ganglioside biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in lipid glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in Golgi membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
beta-1,4 N-acetylgalactosaminyltransferase 1

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Ailuropoda melanoleuca Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM200744v2 Primary Assembly

Genomic

  1. NC_048232.1 Reference ASM200744v2 Primary Assembly

    Range
    34653512..34664954 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_034644229.1 → XP_034500120.1  beta-1,4 N-acetylgalactosaminyltransferase 1

    UniProtKB/TrEMBL
    D2H391, G1LF53
    Related
    ENSAMEP00000035456.1, ENSAMET00000036151.1
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.