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LOC100464745 torsin-1A-interacting protein 2 [ Ailuropoda melanoleuca (giant panda) ]

Gene ID: 100464745, updated on 16-Nov-2023

Summary

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Gene symbol
LOC100464745
Gene description
torsin-1A-interacting protein 2
Locus tag
PANDA_009647
See related
Ensembl:ENSAMEG00000030026
Gene type
protein coding
RefSeq status
MODEL
Organism
Ailuropoda melanoleuca
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Ursidae; Ailuropoda
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Genomic context

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See LOC100464745 in Genome Data Viewer
Location:
chromosome: 8
Exon count:
7
Annotation release Status Assembly Chr Location
103 current ASM200744v2 (GCF_002007445.1) 8 NC_048225.1 (89627109..89666591)
102 previous assembly AilMel_1.0 (GCF_000004335.2) Unplaced Scaffold NW_003217738.1 (1087585..1126460)

Chromosome 8 - NC_048225.1Genomic Context describing neighboring genes Neighboring gene centrosomal protein 350 Neighboring gene coiled-coil-helix-coiled-coil-helix domain-containing protein 2-like Neighboring gene 40S ribosomal protein S27-like Neighboring gene torsin 1A interacting protein 1 Neighboring gene torsin-1A-interacting protein 2 Neighboring gene 60S ribosomal protein L39-like Neighboring gene L-lactate dehydrogenase B chain-like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATPase activator activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in endoplasmic reticulum organization IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in membrane organization IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endoplasmic reticulum IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
torsin-1A-interacting protein 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Ailuropoda melanoleuca Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM200744v2 Primary Assembly

Genomic

  1. NC_048225.1 Reference ASM200744v2 Primary Assembly

    Range
    89627109..89666591
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_011226952.3 → XP_011225254.1  torsin-1A-interacting protein 2

    See identical proteins and their annotated locations for XP_011225254.1

    UniProtKB/TrEMBL
    A0A7N5KPZ2, D2HFH5
    Conserved Domains (1) summary
    pfam05609
    Location:17 → 454
    LAP1C; Lamina-associated polypeptide 1C (LAP1C)

  2. XM_011226951.3 → XP_011225253.1  torsin-1A-interacting protein 2

    See identical proteins and their annotated locations for XP_011225253.1

    UniProtKB/TrEMBL
    A0A7N5KPZ2, D2HFH5
    Conserved Domains (1) summary
    pfam05609
    Location:17 → 454
    LAP1C; Lamina-associated polypeptide 1C (LAP1C)

  3. XM_002920800.4 → XP_002920846.1  torsin-1A-interacting protein 2

    See identical proteins and their annotated locations for XP_002920846.1

    UniProtKB/TrEMBL
    A0A7N5KPZ2, D2HFH5
    Conserved Domains (1) summary
    pfam05609
    Location:17 → 454
    LAP1C; Lamina-associated polypeptide 1C (LAP1C)

  4. XM_019801315.2 → XP_019656874.1  torsin-1A-interacting protein 2

    UniProtKB/TrEMBL
    A0A7N5KPZ2, D2HFH5
    Related
    ENSAMEP00000041404.1, ENSAMET00000037948.1
Nucleotide Protein
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