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HAO2 hydroxyacid oxidase 2 [ Ailuropoda melanoleuca (giant panda) ]

Gene ID: 100464531, updated on 8-Mar-2024

Summary

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Gene symbol
HAO2
Gene description
hydroxyacid oxidase 2
Locus tag
PANDA_018385
See related
Ensembl:ENSAMEG00000017691
Gene type
protein coding
RefSeq status
MODEL
Organism
Ailuropoda melanoleuca
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Ursidae; Ailuropoda
Orthologs
human mouse all
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Genomic context

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See HAO2 in Genome Data Viewer
Location:
chromosome: 2
Exon count:
8
Annotation release Status Assembly Chr Location
103 current ASM200744v2 (GCF_002007445.1) 2 NC_048219.1 (85204207..85229673)
102 previous assembly AilMel_1.0 (GCF_000004335.2) Unplaced Scaffold NW_003218789.1 (423348..447607, complement)

Chromosome 2 - NC_048219.1Genomic Context describing neighboring genes Neighboring gene tryptophanyl tRNA synthetase 2, mitochondrial Neighboring gene uncharacterized LOC117801040 Neighboring gene hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 1 Neighboring gene zinc finger protein 697

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables FMN binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables oxidoreductase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
hydroxyacid oxidase 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Ailuropoda melanoleuca Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM200744v2 Primary Assembly

Genomic

  1. NC_048219.1 Reference ASM200744v2 Primary Assembly

    Range
    85204207..85229673
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_034654183.1 → XP_034510074.1  hydroxyacid oxidase 2

    UniProtKB/TrEMBL
    G1MH58, G1MH63

  2. XM_011236260.3 → XP_011234562.1  hydroxyacid oxidase 2

    UniProtKB/TrEMBL
    G1MH58, G1MH63
    Related
    ENSAMEP00000018692.2, ENSAMET00000019439.2
    Conserved Domains (2) summary
    cd02809
    Location:8 → 343
    alpha_hydroxyacid_oxid_FMN; Family of homologous FMN-dependent alpha-hydroxyacid oxidizing enzymes. This family occurs in both prokaryotes and eukaryotes. Members of this family include flavocytochrome b2 (FCB2), glycolate oxidase (GOX), lactate monooxygenase (LMO), mandelate ...
    pfam01070
    Location:14 → 349
    FMN_dh; FMN-dependent dehydrogenase
Nucleotide Protein
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