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SFMBT1 Scm like with four mbt domains 1 [ Pongo abelii (Sumatran orangutan) ]

Gene ID: 100457179, updated on 26-Mar-2024

Summary

Gene symbol
SFMBT1
Gene description
Scm like with four mbt domains 1
Locus tag
CR201_G0035186
See related
Ensembl:ENSPPYG00000013792
Gene type
protein coding
RefSeq status
MODEL
Organism
Pongo abelii
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Pongo
Orthologs
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Genomic context

See SFMBT1 in Genome Data Viewer
Location:
chromosome: 2
Exon count:
26
Annotation release Status Assembly Chr Location
RS_2024_02 current NHGRI_mPonAbe1-v2.0_pri (GCF_028885655.2) 2 NC_085928.1 (101307950..101455689)
RS_2023_04 previous assembly NHGRI_mPonAbe1-v1.1-hic.freeze_pri (GCF_028885655.1) 3 NC_071988.1 (89085266..89230599)

Chromosome 2 - NC_085928.1Genomic Context describing neighboring genes Neighboring gene RFT1 homolog Neighboring gene SERPINE1 mRNA-binding protein 1-like Neighboring gene STIM activating enhancer Neighboring gene musculoskeletal, embryonic nuclear protein 1

Genomic regions, transcripts, and products

General gene information

Markers

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables chromatin binding IEA
Inferred from Electronic Annotation
more info
PubMed 
enables histone binding IEA
Inferred from Electronic Annotation
more info
PubMed 
enables transcription corepressor activity IEA
Inferred from Electronic Annotation
more info
PubMed 
Process Evidence Code Pubs
involved_in negative regulation of DNA-templated transcription IEA
Inferred from Electronic Annotation
more info
PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
PubMed 

General protein information

Preferred Names
scm-like with four MBT domains protein 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_028885655.2-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference NHGRI_mPonAbe1-v2.0_pri Primary Assembly

Genomic

  1. NC_085928.1 Reference NHGRI_mPonAbe1-v2.0_pri Primary Assembly

    Range
    101307950..101455689
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_054552076.2XP_054408051.2  scm-like with four MBT domains protein 1 isoform X2

  2. XM_054552071.2XP_054408046.2  scm-like with four MBT domains protein 1 isoform X1

  3. XM_054552077.2XP_054408052.2  scm-like with four MBT domains protein 1 isoform X2

  4. XM_024244655.3XP_024100423.3  scm-like with four MBT domains protein 1 isoform X2

  5. XM_054552075.2XP_054408050.2  scm-like with four MBT domains protein 1 isoform X2

  6. XM_054552073.2XP_054408048.2  scm-like with four MBT domains protein 1 isoform X2

  7. XM_054552074.2XP_054408049.2  scm-like with four MBT domains protein 1 isoform X2

  8. XM_054552078.2XP_054408053.2  scm-like with four MBT domains protein 1 isoform X2

  9. XM_054552079.2XP_054408054.2  scm-like with four MBT domains protein 1 isoform X2