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PLEC plectin [ Pongo abelii (Sumatran orangutan) ]

Gene ID: 100457094, updated on 6-Jun-2024

Summary

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Gene symbol
PLEC
Gene description
plectin
Locus tag
CR201_G0050835
See related
Ensembl:ENSPPYG00000038974
Gene type
protein coding
RefSeq status
MODEL
Organism
Pongo abelii
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Pongo
Orthologs
human mouse all
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Genomic context

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See PLEC in Genome Data Viewer
Location:
chromosome: 7
Exon count:
43
Annotation release Status Assembly Chr Location
RS_2024_02 current NHGRI_mPonAbe1-v2.0_pri (GCF_028885655.2) 7 NC_071992.2 (160426601..160488045, complement)
RS_2023_04 previous assembly NHGRI_mPonAbe1-v1.1-hic.freeze_pri (GCF_028885655.1) 8 NC_071993.1 (164055444..164116831, complement)

Chromosome 7 - NC_071992.2Genomic Context describing neighboring genes Neighboring gene nuclear receptor binding protein 2 Neighboring gene epiplakin 1 Neighboring gene poly(ADP-ribose) polymerase family member 10 Neighboring gene glutamate ionotropic receptor NMDA type subunit associated protein 1 Neighboring gene spermatogenesis and centriole associated 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ankyrin binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables cadherin binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables structural constituent of cytoskeleton IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables structural constituent of muscle IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in hemidesmosome assembly IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in intermediate filament cytoskeleton organization IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in wound healing IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in cytoskeleton IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in focal adhesion IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in hemidesmosome IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in intermediate filament IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in perinuclear region of cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in sarcolemma IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
plectin

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_028885655.2-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference NHGRI_mPonAbe1-v2.0_pri Primary Assembly

Genomic

  1. NC_071992.2 Reference NHGRI_mPonAbe1-v2.0_pri Primary Assembly

    Range
    160426601..160488045 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_024250770.3 → XP_024106538.3  plectin isoform X7

    UniProtKB/TrEMBL
    A0A2J8RHI0, A0A8I5YTQ7

  2. XM_063726918.1 → XP_063582988.1  plectin isoform X8

    UniProtKB/TrEMBL
    A0A2J8RHI2

  3. XM_054519242.2 → XP_054375217.2  plectin isoform X25

    UniProtKB/TrEMBL
    A0A8I5YRP0

  4. XM_063726916.1 → XP_063582986.1  plectin isoform X6

    UniProtKB/TrEMBL
    A0A2J8RHI0, A0A8I5YTQ7

  5. XM_063726917.1 → XP_063582987.1  plectin isoform X6

    UniProtKB/TrEMBL
    A0A2J8RHI0, A0A8I5YTQ7

  6. XM_024250774.3 → XP_024106542.3  plectin isoform X18

    UniProtKB/TrEMBL
    A0A2J8RHH1, A0A8I5ULM5

  7. XM_063726922.1 → XP_063582992.1  plectin isoform X13

    UniProtKB/TrEMBL
    A0A2J8RHH1, A0A8I5ULM5

  8. XM_024250775.3 → XP_024106543.3  plectin isoform X21

    UniProtKB/TrEMBL
    A0A2J8RHH0, A0A8I5YPL3

  9. XM_063726925.1 → XP_063582995.1  plectin isoform X19

    UniProtKB/TrEMBL
    A0A2J8RHH0, A0A8I5YPL3

  10. XM_063726914.1 → XP_063582984.1  plectin isoform X2

    UniProtKB/TrEMBL
    A0A2J8RHG9, A0A8I5U835

  11. XM_024250769.3 → XP_024106537.3  plectin isoform X4

    UniProtKB/TrEMBL
    A0A2J8RHG9, A0A8I5U835

  12. XM_063726913.1 → XP_063582983.1  plectin isoform X1

    UniProtKB/TrEMBL
    A0A2J8RHG9, A0A8I5U835

  13. XM_024250768.3 → XP_024106536.3  plectin isoform X3

    UniProtKB/TrEMBL
    A0A2J8RHG9, A0A8I5U835

  14. XM_063726915.1 → XP_063582985.1  plectin isoform X5

    UniProtKB/TrEMBL
    A0A2J8RHH0, A0A8I5YPL3

  15. XM_063726927.1 → XP_063582997.1  plectin isoform X23

    UniProtKB/TrEMBL
    A0A2J8RHL6, A0A8I5UG74

  16. XM_063726926.1 → XP_063582996.1  plectin isoform X20

    UniProtKB/TrEMBL
    A0A2J8RHL6, A0A8I5UG74

  17. XM_024250776.3 → XP_024106544.3  plectin isoform X22

    UniProtKB/TrEMBL
    A0A2J8RHL6, A0A8I5UG74

  18. XM_063726921.1 → XP_063582991.1  plectin isoform X11

    UniProtKB/TrEMBL
    A0A2J8RHL1, A0A8I5U9Y7

  19. XM_063726924.1 → XP_063582994.1  plectin isoform X17

    UniProtKB/TrEMBL
    A0A2J8RHL1, A0A8I5U9Y7

  20. XM_024250773.3 → XP_024106541.3  plectin isoform X15

    UniProtKB/TrEMBL
    A0A2J8RHL1, A0A8I5U9Y7

  21. XM_063726928.1 → XP_063582998.1  plectin isoform X24

    UniProtKB/TrEMBL
    A0A2J8RHL6, A0A8I5UG74

  22. XM_024250771.3 → XP_024106539.3  plectin isoform X12

    UniProtKB/TrEMBL
    A0A2J8RHH2, A0A8I5TAL5

  23. XM_063726919.1 → XP_063582989.1  plectin isoform X9

    UniProtKB/TrEMBL
    A0A2J8RHH2, A0A8I5TAL5

  24. XM_063726923.1 → XP_063582993.1  plectin isoform X16

    UniProtKB/TrEMBL
    A0A2J8RHH6, A0A8I5TY86

  25. XM_024250772.3 → XP_024106540.3  plectin isoform X14

    UniProtKB/TrEMBL
    A0A2J8RHH6, A0A8I5TY86

  26. XM_063726920.1 → XP_063582990.1  plectin isoform X10

    UniProtKB/TrEMBL
    A0A2J8RHH6, A0A8I5TY86
Nucleotide Protein
Heading Accession and Version

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