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ISG20L2 interferon stimulated exonuclease gene 20 like 2 [ Pongo abelii (Sumatran orangutan) ]

Gene ID: 100454848, updated on 26-Mar-2024

Summary

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Gene symbol
ISG20L2
Gene description
interferon stimulated exonuclease gene 20 like 2
Locus tag
CR201_G0019217
See related
Ensembl:ENSPPYG00000000706
Gene type
protein coding
RefSeq status
MODEL
Organism
Pongo abelii
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Pongo
Orthologs
human mouse all
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Genomic context

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See ISG20L2 in Genome Data Viewer
Location:
chromosome: 1
Exon count:
4
Annotation release Status Assembly Chr Location
RS_2024_02 current NHGRI_mPonAbe1-v2.0_pri (GCF_028885655.2) 1 NC_071985.2 (93861764..93869064)
RS_2023_04 previous assembly NHGRI_mPonAbe1-v1.1-hic.freeze_pri (GCF_028885655.1) 1 NC_071985.1 (93861742..93868674)

Chromosome 1 - NC_071985.2Genomic Context describing neighboring genes Neighboring gene heparin binding growth factor Neighboring gene mitochondrial ribosomal protein L24 Neighboring gene methyltransferase like 25B Neighboring gene uncharacterized LOC134760362 Neighboring gene cellular retinoic acid binding protein 2 Neighboring gene nestin

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables 3'-5'-RNA exonuclease activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables nucleic acid binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
interferon-stimulated 20 kDa exonuclease-like 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_028885655.2-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference NHGRI_mPonAbe1-v2.0_pri Primary Assembly

Genomic

  1. NC_071985.2 Reference NHGRI_mPonAbe1-v2.0_pri Primary Assembly

    Range
    93861764..93869064
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_009242923.4 → XP_009241198.1  interferon-stimulated 20 kDa exonuclease-like 2

    See identical proteins and their annotated locations for XP_009241198.1

    UniProtKB/TrEMBL
    A0A2J8VH01, A0A6D2XMY7, H2N5C1
    Conserved Domains (1) summary
    cd06149
    Location:181 → 337
    ISG20; DEDDh 3'-5' exonuclease domain of Interferon Stimulated Gene product of 20 kDa, and similar proteins

  2. XM_009242903.4 → XP_009241178.1  interferon-stimulated 20 kDa exonuclease-like 2

    See identical proteins and their annotated locations for XP_009241178.1

    UniProtKB/TrEMBL
    A0A2J8VH01, A0A6D2XMY7, H2N5C1
    Conserved Domains (1) summary
    cd06149
    Location:181 → 337
    ISG20; DEDDh 3'-5' exonuclease domain of Interferon Stimulated Gene product of 20 kDa, and similar proteins

  3. XM_009242897.4 → XP_009241172.1  interferon-stimulated 20 kDa exonuclease-like 2

    See identical proteins and their annotated locations for XP_009241172.1

    UniProtKB/TrEMBL
    A0A2J8VH01, A0A6D2XMY7, H2N5C1
    Related
    ENSPPYP00000000817.2
    Conserved Domains (1) summary
    cd06149
    Location:181 → 337
    ISG20; DEDDh 3'-5' exonuclease domain of Interferon Stimulated Gene product of 20 kDa, and similar proteins

  4. XM_009242915.4 → XP_009241190.1  interferon-stimulated 20 kDa exonuclease-like 2

    See identical proteins and their annotated locations for XP_009241190.1

    UniProtKB/TrEMBL
    A0A2J8VH01, A0A6D2XMY7, H2N5C1
    Conserved Domains (1) summary
    cd06149
    Location:181 → 337
    ISG20; DEDDh 3'-5' exonuclease domain of Interferon Stimulated Gene product of 20 kDa, and similar proteins

  5. XM_009242930.4 → XP_009241205.1  interferon-stimulated 20 kDa exonuclease-like 2

    See identical proteins and their annotated locations for XP_009241205.1

    UniProtKB/TrEMBL
    A0A2J8VH01, A0A6D2XMY7, H2N5C1
    Conserved Domains (1) summary
    cd06149
    Location:181 → 337
    ISG20; DEDDh 3'-5' exonuclease domain of Interferon Stimulated Gene product of 20 kDa, and similar proteins
Nucleotide Protein
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