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CLEC12A C-type lectin domain family 12 member A [ Pongo abelii (Sumatran orangutan) ]

Gene ID: 100454834, updated on 10-Oct-2024

Summary

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Gene symbol
CLEC12A
Gene description
C-type lectin domain family 12 member A
Locus tag
CR201_G0051069
See related
Ensembl:ENSPPYG00000004262
Gene type
protein coding
RefSeq status
MODEL
Organism
Pongo abelii
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Pongo
Orthologs
human mouse all
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Genomic context

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See CLEC12A in Genome Data Viewer
Location:
chromosome: 10
Exon count:
9
Annotation release Status Assembly Chr Location
RS_2024_02 current NHGRI_mPonAbe1-v2.0_pri (GCF_028885655.2) 10 NC_071995.2 (10391481..10444288)
RS_2023_04 previous assembly NHGRI_mPonAbe1-v1.1-hic.freeze_pri (GCF_028885655.1) 12 NC_071997.1 (10430997..10445158)

Chromosome 10 - NC_071995.2Genomic Context describing neighboring genes Neighboring gene C-type lectin domain family 2 member B Neighboring gene killer cell lectin like receptor F2 Neighboring gene C-type lectin domain family 2 member A Neighboring gene small nucleolar RNA U13 Neighboring gene C-type lectin domain family 1 member B

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables signaling receptor regulator activity IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
C-type lectin domain family 12 member A

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_028885655.2-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference NHGRI_mPonAbe1-v2.0_pri Primary Assembly

Genomic

  1. NC_071995.2 Reference NHGRI_mPonAbe1-v2.0_pri Primary Assembly

    Range
    10391481..10444288
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_063712013.1 → XP_063568083.1  C-type lectin domain family 12 member A isoform X1

    UniProtKB/TrEMBL
    A0A6D2WID1

  2. XM_003777967.5 → XP_003778015.1  C-type lectin domain family 12 member A isoform X1

    UniProtKB/TrEMBL
    A0A6D2WID1, A0A8I5TYS8
    Related
    ENSPPYP00000037892.1
    Conserved Domains (1) summary
    cd03593
    Location:133 → 250
    CLECT_NK_receptors_like; C-type lectin-like domain (CTLD) of the type found in natural killer cell receptors (NKRs)

  3. XM_054526806.1 → XP_054382781.1  C-type lectin domain family 12 member A isoform X2

    UniProtKB/TrEMBL
    A0A2J8RGR0, A0A2J8RGS7, H2NGH0
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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