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TRIM75 tripartite motif containing 75 [ Pongo abelii (Sumatran orangutan) ]

Gene ID: 100454661, updated on 26-Mar-2024

Summary

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Gene symbol
TRIM75
Gene description
tripartite motif containing 75
Locus tag
CR201_G0014187
See related
Ensembl:ENSPPYG00000015174
Gene type
protein coding
RefSeq status
MODEL
Organism
Pongo abelii
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Pongo
Orthologs
human mouse all
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Genomic context

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See TRIM75 in Genome Data Viewer
Location:
chromosome: 3
Exon count:
1
Annotation release Status Assembly Chr Location
RS_2024_02 current NHGRI_mPonAbe1-v2.0_pri (GCF_028885655.2) 3 NC_071988.2 (187088040..187089837)
RS_2023_04 previous assembly NHGRI_mPonAbe1-v1.1-hic.freeze_pri (GCF_028885655.1) 4 NC_071989.1 (187125329..187127126)

Chromosome 3 - NC_071988.2Genomic Context describing neighboring genes Neighboring gene endogenous retrovirus group K member 8 Gag polyprotein-like Neighboring gene tripartite motif containing 60 Neighboring gene small ribosomal subunit protein uS10-like Neighboring gene transmembrane protein 192

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables ubiquitin protein ligase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables zinc ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein ubiquitination IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
tripartite motif-containing protein 75
Names
TRIM75P
putative tripartite motif-containing protein 75

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_028885655.2-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference NHGRI_mPonAbe1-v2.0_pri Primary Assembly

Genomic

  1. NC_071988.2 Reference NHGRI_mPonAbe1-v2.0_pri Primary Assembly

    Range
    187088040..187089837
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_002815267.2 → XP_002815313.1  tripartite motif-containing protein 75

    UniProtKB/TrEMBL
    A0A2J8W028, H2PEN9
    Related
    ENSPPYP00000016955.2
    Conserved Domains (5) summary
    cd00021
    Location:95 → 133
    BBOX; B-Box-type zinc finger; zinc binding domain (CHC3H2); often present in combination with other motifs, like RING zinc finger, NHL motif, coiled-coil or RFP domain in functionally unrelated proteins, most likely mediating protein-protein interaction.
    cd15829
    Location:276 → 462
    SPRY_PRY_TRIM75; PRY/SPRY domain of tripartite motif-binding protein 75 (TRIM75)
    cd16590
    Location:13 → 57
    RING-HC_TRIM4_C-IV_like; RING finger, HC subclass, found in tripartite motif-containing proteins, TRIM4, TRIM75, tripartite motif family-like protein 1 (TRIML1) and similar proteins
    cl27539
    Location:127 → 233
    Peptidase_M23; Peptidase family M23
    cl28410
    Location:5 → 103
    RAD18; RING-finger-containing E3 ubiquitin ligase [Signal transduction mechanisms]
Nucleotide Protein
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