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CLEC10A C-type lectin domain containing 10A [ Pongo abelii (Sumatran orangutan) ]

Gene ID: 100450051, updated on 26-Mar-2024

Summary

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Gene symbol
CLEC10A
Gene description
C-type lectin domain containing 10A
Locus tag
CR201_G0048130
See related
Ensembl:ENSPPYG00000007894
Gene type
protein coding
RefSeq status
MODEL
Organism
Pongo abelii
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Pongo
Orthologs
human all
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Genomic context

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See CLEC10A in Genome Data Viewer
Location:
chromosome: 19
Exon count:
9
Annotation release Status Assembly Chr Location
RS_2024_02 current NHGRI_mPonAbe1-v2.0_pri (GCF_028885655.2) 19 NC_072004.2 (6922361..6928806, complement)
RS_2023_04 previous assembly NHGRI_mPonAbe1-v1.1-hic.freeze_pri (GCF_028885655.1) 17 NC_072002.1 (6932974..6939240, complement)

Chromosome 19 - NC_072004.2Genomic Context describing neighboring genes Neighboring gene solute carrier family 16 member 13 Neighboring gene solute carrier family 16 member 11 Neighboring gene asialoglycoprotein receptor 2 Neighboring gene asialoglycoprotein receptor 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables signaling receptor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
C-type lectin domain family 10 member A

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_028885655.2-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference NHGRI_mPonAbe1-v2.0_pri Primary Assembly

Genomic

  1. NC_072004.2 Reference NHGRI_mPonAbe1-v2.0_pri Primary Assembly

    Range
    6922361..6928806 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_024235142.3 → XP_024090910.2  C-type lectin domain family 10 member A isoform X3

  2. XM_002826935.4 → XP_002826981.3  C-type lectin domain family 10 member A isoform X2

  3. XM_002826936.4 → XP_002826982.3  C-type lectin domain family 10 member A isoform X1

Nucleotide Protein
Heading Accession and Version

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Molecular Biology Databases
Research Materials