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GPC2 glypican 2 [ Pongo abelii (Sumatran orangutan) ]

Gene ID: 100445957, updated on 6-Jun-2024

Summary

Gene symbol
GPC2
Gene description
glypican 2
Locus tag
CR201_G0048538
See related
Ensembl:ENSPPYG00000017406
Gene type
protein coding
RefSeq status
MODEL
Organism
Pongo abelii
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Pongo
Orthologs
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Genomic context

See GPC2 in Genome Data Viewer
Location:
chromosome: 6
Exon count:
10
Annotation release Status Assembly Chr Location
RS_2024_02 current NHGRI_mPonAbe1-v2.0_pri (GCF_028885655.2) 6 NC_071991.2 (9920045..9927553, complement)
RS_2023_04 previous assembly NHGRI_mPonAbe1-v1.1-hic.freeze_pri (GCF_028885655.1) 7 NC_071992.1 (3846218..3853986, complement)

Chromosome 6 - NC_071991.2Genomic Context describing neighboring genes Neighboring gene trafficking protein particle complex subunit 14 Neighboring gene galactose-3-O-sulfotransferase 4 Neighboring gene STAG3 cohesin complex component Neighboring gene large ribosomal subunit protein eL29-like Neighboring gene PVR related immunoglobulin domain containing

Genomic regions, transcripts, and products

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_028885655.2-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference NHGRI_mPonAbe1-v2.0_pri Primary Assembly

Genomic

  1. NC_071991.2 Reference NHGRI_mPonAbe1-v2.0_pri Primary Assembly

    Range
    9920045..9927553 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_024249483.3XP_024105251.2  glypican-2

    UniProtKB/TrEMBL
    H2PLM3