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SLC41A3 solute carrier family 41 member 3 [ Pongo abelii (Sumatran orangutan) ]

Gene ID: 100444320, updated on 10-Oct-2024

Summary

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Gene symbol
SLC41A3
Gene description
solute carrier family 41 member 3
Locus tag
CR201_G0032025
See related
Ensembl:ENSPPYG00000013457
Gene type
protein coding
RefSeq status
MODEL
Organism
Pongo abelii
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Pongo
Orthologs
human mouse all
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Genomic context

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See SLC41A3 in Genome Data Viewer
Location:
chromosome: 2
Exon count:
12
Annotation release Status Assembly Chr Location
RS_2024_02 current NHGRI_mPonAbe1-v2.0_pri (GCF_028885655.2) 2 NC_085928.1 (11740602..11824500)
RS_2023_04 previous assembly NHGRI_mPonAbe1-v1.1-hic.freeze_pri (GCF_028885655.1) 3 NC_071988.1 (11850262..11934057)

Chromosome 2 - NC_085928.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC129058442 Neighboring gene uncharacterized LOC129058443 Neighboring gene U1 spliceosomal RNA Neighboring gene aldehyde dehydrogenase 1 family member L1 Neighboring gene uncharacterized LOC129058444 Neighboring gene ropporin-1B Neighboring gene uncharacterized LOC129058447

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables monoatomic cation transmembrane transporter activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in monoatomic cation transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
solute carrier family 41 member 3

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_028885655.2-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference NHGRI_mPonAbe1-v2.0_pri Primary Assembly

Genomic

  1. NC_085928.1 Reference NHGRI_mPonAbe1-v2.0_pri Primary Assembly

    Range
    11740602..11824500
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_054551335.2 → XP_054407310.1  solute carrier family 41 member 3 isoform X1

    UniProtKB/TrEMBL
    A0A2J8TV23, A0A8I5T477

  2. XM_054551336.2 → XP_054407311.2  solute carrier family 41 member 3 isoform X2

  3. XM_054551337.2 → XP_054407312.1  solute carrier family 41 member 3 isoform X3

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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Molecular Biology Databases
Research Materials