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KLF15 KLF transcription factor 15 [ Pongo abelii (Sumatran orangutan) ]

Gene ID: 100442859, updated on 26-Mar-2024

Summary

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Gene symbol
KLF15
Gene description
KLF transcription factor 15
Locus tag
CR201_G0032034
See related
Ensembl:ENSPPYG00000013455
Gene type
protein coding
RefSeq status
MODEL
Organism
Pongo abelii
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Pongo
Orthologs
human mouse all
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Genomic context

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See KLF15 in Genome Data Viewer
Location:
chromosome: 2
Exon count:
3
Annotation release Status Assembly Chr Location
RS_2024_02 current NHGRI_mPonAbe1-v2.0_pri (GCF_028885655.2) 2 NC_085928.1 (11481000..11495777)
RS_2023_04 previous assembly NHGRI_mPonAbe1-v1.1-hic.freeze_pri (GCF_028885655.1) 3 NC_071988.1 (11590545..11605292)

Chromosome 2 - NC_085928.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC112132705 Neighboring gene cilia and flagella associated protein 100 Neighboring gene uncharacterized LOC129058441 Neighboring gene uncharacterized LOC129058442 Neighboring gene uncharacterized LOC129058443 Neighboring gene U1 spliceosomal RNA Neighboring gene aldehyde dehydrogenase 1 family member L1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
Krueppel-like factor 15
Names
Kruppel like factor 15

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_028885655.2-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference NHGRI_mPonAbe1-v2.0_pri Primary Assembly

Genomic

  1. NC_085928.1 Reference NHGRI_mPonAbe1-v2.0_pri Primary Assembly

    Range
    11481000..11495777
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_024244230.3 → XP_024099998.1  Krueppel-like factor 15

    UniProtKB/TrEMBL
    A0A2J8TV52, A0A663DEC0, H2P9H2
    Related
    ENSPPYP00000015049.2
    Conserved Domains (2) summary
    COG5189
    Location:306 → 401
    SFP1; Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning]
    sd00017
    Location:323 → 345
    ZF_C2H2; C2H2 Zn finger [structural motif]
Nucleotide Protein
Heading Accession and Version

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Research Materials