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CFAP100 cilia and flagella associated protein 100 [ Pongo abelii (Sumatran orangutan) ]

Gene ID: 100442483, updated on 26-Mar-2024

Summary

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Gene symbol
CFAP100
Gene description
cilia and flagella associated protein 100
Locus tag
CR201_G0032036
See related
Ensembl:ENSPPYG00000013454
Gene type
protein coding
RefSeq status
MODEL
Organism
Pongo abelii
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Pongo
Orthologs
human mouse all
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Genomic context

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See CFAP100 in Genome Data Viewer
Location:
chromosome: 2
Exon count:
19
Annotation release Status Assembly Chr Location
RS_2024_02 current NHGRI_mPonAbe1-v2.0_pri (GCF_028885655.2) 2 NC_085928.1 (11402842..11444183, complement)
RS_2023_04 previous assembly NHGRI_mPonAbe1-v1.1-hic.freeze_pri (GCF_028885655.1) 3 NC_071988.1 (11512303..11553617, complement)

Chromosome 2 - NC_085928.1Genomic Context describing neighboring genes Neighboring gene urocanate hydratase 1 Neighboring gene ZXD family zinc finger C Neighboring gene uncharacterized LOC112132705 Neighboring gene uncharacterized LOC129058441 Neighboring gene KLF transcription factor 15

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Component Evidence Code Pubs
located_in ciliary basal body IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
cilia- and flagella-associated protein 100

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_028885655.2-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference NHGRI_mPonAbe1-v2.0_pri Primary Assembly

Genomic

  1. NC_085928.1 Reference NHGRI_mPonAbe1-v2.0_pri Primary Assembly

    Range
    11402842..11444183 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_054551331.2 → XP_054407306.1  cilia- and flagella-associated protein 100 isoform X1

  2. XM_054551333.2 → XP_054407308.1  cilia- and flagella-associated protein 100 isoform X1

  3. XM_054551332.2 → XP_054407307.1  cilia- and flagella-associated protein 100 isoform X1

  4. XM_009238437.4 → XP_009236712.2  cilia- and flagella-associated protein 100 isoform X2

  5. XM_054551334.2 → XP_054407309.1  cilia- and flagella-associated protein 100 isoform X3

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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