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GALNT3 polypeptide N-acetylgalactosaminyltransferase 3 [ Pongo abelii (Sumatran orangutan) ]

Gene ID: 100442252, updated on 26-Mar-2024

Summary

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Gene symbol
GALNT3
Gene description
polypeptide N-acetylgalactosaminyltransferase 3
Locus tag
CR201_G0037611
See related
Ensembl:ENSPPYG00000012896
Gene type
protein coding
RefSeq status
MODEL
Organism
Pongo abelii
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Pongo
Orthologs
human mouse all
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Genomic context

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See GALNT3 in Genome Data Viewer
Location:
chromosome: 11
Exon count:
12
Annotation release Status Assembly Chr Location
RS_2024_02 current NHGRI_mPonAbe1-v2.0_pri (GCF_028885655.2) 11 NC_071996.2 (68279405..68326620, complement)
RS_2023_04 previous assembly NHGRI_mPonAbe1-v1.1-hic.freeze_pri (GCF_028885655.1) 2B NC_071987.1 (65641226..65688309, complement)

Chromosome 11 - NC_071996.2Genomic Context describing neighboring genes Neighboring gene microtubule-associated protein RP/EB family member 1-like Neighboring gene sodium voltage-gated channel alpha subunit 2 Neighboring gene cysteine and serine rich nuclear protein 3 Neighboring gene uncharacterized LOC129058017 Neighboring gene uncharacterized LOC100936870 Neighboring gene tetratricopeptide repeat domain 21B

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables polypeptide N-acetylgalactosaminyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein O-linked glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in Golgi apparatus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
polypeptide N-acetylgalactosaminyltransferase 3
Names
UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 3 (GalNAc-T3)

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_028885655.2-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference NHGRI_mPonAbe1-v2.0_pri Primary Assembly

Genomic

  1. NC_071996.2 Reference NHGRI_mPonAbe1-v2.0_pri Primary Assembly

    Range
    68279405..68326620 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_054549426.2 → XP_054405401.1  polypeptide N-acetylgalactosaminyltransferase 3

  2. XM_063712842.1 → XP_063568912.1  polypeptide N-acetylgalactosaminyltransferase 3

  3. XM_063712841.1 → XP_063568911.1  polypeptide N-acetylgalactosaminyltransferase 3

  4. XM_063712839.1 → XP_063568909.1  polypeptide N-acetylgalactosaminyltransferase 3

  5. XM_063712840.1 → XP_063568910.1  polypeptide N-acetylgalactosaminyltransferase 3

  6. XM_063712843.1 → XP_063568913.1  polypeptide N-acetylgalactosaminyltransferase 3

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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Molecular Biology Databases
Research Materials