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GNPTAB N-acetylglucosamine-1-phosphate transferase subunits alpha and beta [ Pongo abelii (Sumatran orangutan) ]

Gene ID: 100441852, updated on 26-Mar-2024

Summary

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Gene symbol
GNPTAB
Gene description
N-acetylglucosamine-1-phosphate transferase subunits alpha and beta
Locus tag
CR201_G0001300
See related
Ensembl:ENSPPYG00000004877
Gene type
protein coding
RefSeq status
MODEL
Organism
Pongo abelii
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Pongo
Orthologs
human mouse all
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Genomic context

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See GNPTAB in Genome Data Viewer
Location:
chromosome: 10
Exon count:
21
Annotation release Status Assembly Chr Location
RS_2024_02 current NHGRI_mPonAbe1-v2.0_pri (GCF_028885655.2) 10 NC_071995.2 (100351645..100436167, complement)
RS_2023_04 previous assembly NHGRI_mPonAbe1-v1.1-hic.freeze_pri (GCF_028885655.1) 12 NC_071997.1 (100315595..100400110, complement)

Chromosome 10 - NC_071995.2Genomic Context describing neighboring genes Neighboring gene myosin binding protein C1 Neighboring gene uncharacterized LOC129049206 Neighboring gene choline phosphotransferase 1 Neighboring gene synaptonemal complex protein 3 Neighboring gene U6 spliceosomal RNA Neighboring gene small nucleolar RNA U13 Neighboring gene U6 spliceosomal RNA Neighboring gene U6 spliceosomal RNA Neighboring gene 10 kDa heat shock protein, mitochondrial-like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables UDP-N-acetylglucosamine-lysosomal-enzyme N-acetylglucosaminephosphotransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables calcium ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in N-glycan processing to lysosome IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in carbohydrate phosphorylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in Golgi apparatus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
N-acetylglucosamine-1-phosphotransferase subunits alpha/beta
Names
N-acetylglucosamine-1-phosphate transferase alpha and beta subunits

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_028885655.2-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference NHGRI_mPonAbe1-v2.0_pri Primary Assembly

Genomic

  1. NC_071995.2 Reference NHGRI_mPonAbe1-v2.0_pri Primary Assembly

    Range
    100351645..100436167 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_002823649.5 → XP_002823695.2  N-acetylglucosamine-1-phosphotransferase subunits alpha/beta isoform X1

    UniProtKB/TrEMBL
    A0A2J8XMD8, H2NIE9
    Related
    ENSPPYP00000005567.3
    Conserved Domains (6) summary
    pfam06464
    Location:699 → 814
    DMAP_binding; DMAP1-binding Domain
    pfam00066
    Location:436 → 469
    Notch; LNR domain
    pfam11380
    Location:322 → 429
    Stealth_CR2; Stealth protein CR2, conserved region 2
    pfam17101
    Location:73 → 101
    Stealth_CR1; Stealth protein CR1, conserved region 1
    pfam17102
    Location:954 → 1002
    Stealth_CR3; Stealth protein CR3, conserved region 3
    pfam17103
    Location:1137 → 1193
    Stealth_CR4; Stealth protein CR4, conserved region 4

  2. XM_024256585.3 → XP_024112353.1  N-acetylglucosamine-1-phosphotransferase subunits alpha/beta isoform X2

    Conserved Domains (6) summary
    pfam06464
    Location:627 → 742
    DMAP_binding; DMAP1-binding Domain
    pfam00066
    Location:364 → 397
    Notch; LNR domain
    pfam11380
    Location:250 → 357
    Stealth_CR2; Stealth protein CR2, conserved region 2
    pfam17101
    Location:1 → 29
    Stealth_CR1; Stealth protein CR1, conserved region 1
    pfam17102
    Location:882 → 930
    Stealth_CR3; Stealth protein CR3, conserved region 3
    pfam17103
    Location:1065 → 1121
    Stealth_CR4; Stealth protein CR4, conserved region 4
Nucleotide Protein
Heading Accession and Version

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