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PIGZ phosphatidylinositol glycan anchor biosynthesis class Z [ Pongo abelii (Sumatran orangutan) ]

Gene ID: 100432628, updated on 26-Mar-2024

Summary

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Gene symbol
PIGZ
Gene description
phosphatidylinositol glycan anchor biosynthesis class Z
Locus tag
CR201_G0051172
See related
Ensembl:ENSPPYG00000014451
Gene type
protein coding
RefSeq status
MODEL
Organism
Pongo abelii
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Pongo
Orthologs
human mouse all
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Genomic context

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See PIGZ in Genome Data Viewer
Location:
chromosome: 2
Exon count:
2
Annotation release Status Assembly Chr Location
RS_2024_02 current NHGRI_mPonAbe1-v2.0_pri (GCF_028885655.2) 2 NC_085928.1 (207426545..207433019, complement)
RS_2023_04 previous assembly NHGRI_mPonAbe1-v1.1-hic.freeze_pri (GCF_028885655.1) 3 NC_071988.1 (195223178..195228854, complement)

Chromosome 2 - NC_085928.1Genomic Context describing neighboring genes Neighboring gene nuclear cap binding protein subunit 2 Neighboring gene NCBP2 antisense 2 (head to head) Neighboring gene small ribosomal subunit protein uS2B-like Neighboring gene uncharacterized LOC112131271 Neighboring gene melanotransferrin

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables alpha-1,2-mannosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in GPI anchor biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endoplasmic reticulum membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
GPI mannosyltransferase 4

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_028885655.2-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference NHGRI_mPonAbe1-v2.0_pri Primary Assembly

Genomic

  1. NC_085928.1 Reference NHGRI_mPonAbe1-v2.0_pri Primary Assembly

    Range
    207426545..207433019 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_024241205.3 → XP_024096973.1  GPI mannosyltransferase 4

    UniProtKB/TrEMBL
    A0A2J8RG56, H2PCG9
    Related
    ENSPPYP00000016160.2
    Conserved Domains (1) summary
    cl21590
    Location:44 → 391
    PMT_2; Dolichyl-phosphate-mannose-protein mannosyltransferase
Nucleotide Protein
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