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MIR4289 microRNA 4289 [ Homo sapiens (human) ]

Gene ID: 100423015, updated on 8-Nov-2023

Summary

Official Symbol
MIR4289provided by HGNC
Official Full Name
microRNA 4289provided by HGNC
Primary source
HGNC:HGNC:38278
See related
Ensembl:ENSG00000265873 miRBase:MI0015898; AllianceGenome:HGNC:38278
Gene type
ncRNA
RefSeq status
PROVISIONAL
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Summary
microRNAs (miRNAs) are short (20-24 nt) non-coding RNAs that are involved in post-transcriptional regulation of gene expression in multicellular organisms by affecting both the stability and translation of mRNAs. miRNAs are transcribed by RNA polymerase II as part of capped and polyadenylated primary transcripts (pri-miRNAs) that can be either protein-coding or non-coding. The primary transcript is cleaved by the Drosha ribonuclease III enzyme to produce an approximately 70-nt stem-loop precursor miRNA (pre-miRNA), which is further cleaved by the cytoplasmic Dicer ribonuclease to generate the mature miRNA and antisense miRNA star (miRNA*) products. The mature miRNA is incorporated into a RNA-induced silencing complex (RISC), which recognizes target mRNAs through imperfect base pairing with the miRNA and most commonly results in translational inhibition or destabilization of the target mRNA. The RefSeq represents the predicted microRNA stem-loop. [provided by RefSeq, Sep 2009]
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Genomic context

Location:
9q22.1
Exon count:
1
Annotation release Status Assembly Chr Location
RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 9 NC_000009.12 (88745836..88745905, complement)
RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 9 NC_060933.1 (100907971..100908040, complement)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 9 NC_000009.11 (91360751..91360820, complement)

Chromosome 9 - NC_000009.12Genomic Context describing neighboring genes Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr9:91149879-91150713 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr9:91150714-91151547 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 28525 Neighboring gene nucleoredoxin like 2 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr9:91204313-91204818 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 28526 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr9:91240150-91240802 Neighboring gene long intergenic non-protein coding RNA 2843 Neighboring gene BRD4-independent group 4 enhancer GRCh37_chr9:91266744-91267943 Neighboring gene uncharacterized LOC105376135 Neighboring gene Sharpr-MPRA regulatory region 914 Neighboring gene ReSE screen-validated silencer GRCh37_chr9:91392997-91393236 Neighboring gene uncharacterized LOC124902205 Neighboring gene Sharpr-MPRA regulatory region 12308 Neighboring gene PEST containing nuclear protein pseudogene 2

Genomic regions, transcripts, and products

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_036252.1 RNA Sequence

    Status: PROVISIONAL

    Source sequence(s)
    AL390791
    Related
    ENST00000581736.1

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000009.12 Reference GRCh38.p14 Primary Assembly

    Range
    88745836..88745905 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Reference GRCh38.p14 PATCHES

Genomic

  1. NW_025791787.1 Reference GRCh38.p14 PATCHES

    Range
    232109..232178 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060933.1 Alternate T2T-CHM13v2.0

    Range
    100907971..100908040 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)