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MIR4309 microRNA 4309 [ Homo sapiens (human) ]

Gene ID: 100422954, updated on 10-Oct-2023

Summary

Official Symbol
MIR4309provided by HGNC
Official Full Name
microRNA 4309provided by HGNC
Primary source
HGNC:HGNC:38336
See related
Ensembl:ENSG00000266015 miRBase:MI0015837; AllianceGenome:HGNC:38336
Gene type
ncRNA
RefSeq status
PROVISIONAL
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Summary
microRNAs (miRNAs) are short (20-24 nt) non-coding RNAs that are involved in post-transcriptional regulation of gene expression in multicellular organisms by affecting both the stability and translation of mRNAs. miRNAs are transcribed by RNA polymerase II as part of capped and polyadenylated primary transcripts (pri-miRNAs) that can be either protein-coding or non-coding. The primary transcript is cleaved by the Drosha ribonuclease III enzyme to produce an approximately 70-nt stem-loop precursor miRNA (pre-miRNA), which is further cleaved by the cytoplasmic Dicer ribonuclease to generate the mature miRNA and antisense miRNA star (miRNA*) products. The mature miRNA is incorporated into a RNA-induced silencing complex (RISC), which recognizes target mRNAs through imperfect base pairing with the miRNA and most commonly results in translational inhibition or destabilization of the target mRNA. The RefSeq represents the predicted microRNA stem-loop. [provided by RefSeq, Sep 2009]
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Genomic context

See MIR4309 in Genome Data Viewer
Location:
14q32.31
Exon count:
1
Annotation release Status Assembly Chr Location
RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 14 NC_000014.9 (102539644..102539726)
RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 14 NC_060938.1 (96775569..96775651)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 14 NC_000014.8 (103005981..103006063)

Chromosome 14 - NC_000014.9Genomic Context describing neighboring genes Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr14:102976187-102976830 Neighboring gene uncharacterized LOC105370679 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr14:102976831-102977476 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr14:102977477-102978120 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 6119 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 6120 Neighboring gene uncharacterized LOC105370680 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 9073 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 6121 Neighboring gene H3K27ac hESC enhancer GRCh37_chr14:102995075-102995576 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 6122 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 6123 Neighboring gene long intergenic non-protein coding RNA 2323 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 6124 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 6125 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr14:103022683-103023183 Neighboring gene MPRA-validated peak2254 silencer Neighboring gene ATAC-STARR-seq lymphoblastoid active region 9074 Neighboring gene NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr14:103036323-103036892 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr14:103039389-103040275 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr14:103040276-103041163 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr14:103045898-103046584 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr14:103046585-103047269 Neighboring gene RNA, 7SL, cytoplasmic 546, pseudogene

Genomic regions, transcripts, and products

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_036192.1 RNA Sequence

    Status: PROVISIONAL

    Source sequence(s)
    AL136293
    Related
    ENST00000582498.1

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000014.9 Reference GRCh38.p14 Primary Assembly

    Range
    102539644..102539726
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060938.1 Alternate T2T-CHM13v2.0

    Range
    96775569..96775651
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)