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TRPC6P4 TRPC6 pseudogene 4 [ Homo sapiens (human) ]

Gene ID: 100422500, updated on 28-Oct-2024

Summary

Official Symbol
TRPC6P4provided by HGNC
Official Full Name
TRPC6 pseudogene 4provided by HGNC
Primary source
HGNC:HGNC:55945
See related
AllianceGenome:HGNC:55945
Gene type
pseudo
RefSeq status
INFERRED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
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Genomic context

See TRPC6P4 in Genome Data Viewer
Location:
9q31.1
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 9 NC_000009.12 (101125056..101125902, complement)
RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 9 NC_060933.1 (113296995..113297841, complement)
RS_2024_09 previous assembly GRCh37.p13 (GCF_000001405.25) 9 NC_000009.11 (103887338..103888184, complement)

Chromosome 9 - NC_000009.12Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC105376181 Neighboring gene H3K27ac hESC enhancer GRCh37_chr9:103687397-103687897 Neighboring gene glyceraldehyde 3 phosphate dehydrogenase pseudogene 26 Neighboring gene phospholipid phosphatase related 1 Neighboring gene OCT4-NANOG hESC enhancer GRCh37_chr9:103835332-103835884 Neighboring gene OCT4-NANOG hESC enhancer GRCh37_chr9:103860451-103861022 Neighboring gene OCT4-NANOG hESC enhancer GRCh37_chr9:103861023-103861592 Neighboring gene NANOG hESC enhancer GRCh37_chr9:103877350-103877851 Neighboring gene Sharpr-MPRA regulatory region 7573 Neighboring gene uncharacterized LOC105376183 Neighboring gene uncharacterized LOC105376182

Genomic regions, transcripts, and products

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

Genomic

  1. NG_023855.1 

    Range
    101..947
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    GenBank, FASTA, Sequence Viewer (Graphics)

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000009.12 Reference GRCh38.p14 Primary Assembly

    Range
    101125056..101125902 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Reference GRCh38.p14 ALT_REF_LOCI_1

Genomic

  1. NT_187578.1 Reference GRCh38.p14 ALT_REF_LOCI_1

    Range
    176259..177105 complement
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    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060933.1 Alternate T2T-CHM13v2.0

    Range
    113296995..113297841 complement
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    GenBank, FASTA, Sequence Viewer (Graphics)