U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

HNRNPCP4 heterogeneous nuclear ribonucleoprotein C pseudogene 4 [ Homo sapiens (human) ]

Gene ID: 100421828, updated on 17-Jun-2024

Summary

Go to the top of the page Help
Official Symbol
HNRNPCP4provided by HGNC
Official Full Name
heterogeneous nuclear ribonucleoprotein C pseudogene 4provided by HGNC
Primary source
HGNC:HGNC:48816
See related
AllianceGenome:HGNC:48816
Gene type
pseudo
RefSeq status
INFERRED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See HNRNPCP4 in Genome Data Viewer
Location:
16p13.13
Annotation release Status Assembly Chr Location
RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 16 NC_000016.10 (11242466..11243749)
RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 16 NC_060940.1 (11278700..11279983)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 16 NC_000016.9 (11336323..11337606)

Chromosome 16 - NC_000016.10Genomic Context describing neighboring genes Neighboring gene C-type lectin domain containing 16A Neighboring gene uncharacterized LOC105371081 Neighboring gene NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr16:11234584-11235161 Neighboring gene NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr16:11234005-11234583 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr16:11235162-11235740 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr16:11238795-11239462 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr16:11268031-11268544 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 10413 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr16:11275481-11276366 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr16:11276367-11277253 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr16:11290798-11291307 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr16:11291308-11291816 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr16:11292853-11293353 Neighboring gene P300/CBP strongly-dependent group 1 enhancer GRCh37_chr16:11295121-11296320 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr16:11296313-11297109 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 10415 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 10416 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 10417 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 10418 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 10419 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr16:11304646-11305240 Neighboring gene uncharacterized LOC107984859 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 10420 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 10421 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 10422 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 10423 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 10424 Neighboring gene CRISPRi-validated cis-regulatory element chr16.1224 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 10425 Neighboring gene Sharpr-MPRA regulatory region 4189 Neighboring gene uncharacterized LOC105371082 Neighboring gene ReSE screen-validated silencer GRCh37_chr16:11344039-11344246 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 10426 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 10427 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 7197 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 7198 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 7199 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 7200 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 7201 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 10428 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr16:11359883-11360383 Neighboring gene suppressor of cytokine signaling 1 Neighboring gene transition protein 2

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

GeneRIFs: Gene References Into Functions

Phenotypes

Go to the top of the page Help

Review eQTL and phenotype association data in this region using PheGenI

Variation

Go to the top of the page Help

See studies and variants in dbVar

See Variation Viewer (GRCh37.p13)

See Variation Viewer (GRCh38)

General gene information

Go to the top of the page Help

Other Names

  • heterogeneous nuclear ribonucleoprotein C (C1/C2) pseudogene

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

Genomic

  1. NG_026395.2 

    Range
    14..1297
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000016.10 Reference GRCh38.p14 Primary Assembly

    Range
    11242466..11243749
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060940.1 Alternate T2T-CHM13v2.0

    Range
    11278700..11279983
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases
Research Materials