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LOC100421258 NOP58 ribonucleoprotein homolog (yeast) pseudogene [ Homo sapiens (human) ]

Gene ID: 100421258, updated on 17-Jun-2024

Summary

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Gene symbol
LOC100421258
Gene description
NOP58 ribonucleoprotein homolog (yeast) pseudogene
Gene type
pseudo
RefSeq status
INFERRED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
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Genomic context

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See LOC100421258 in Genome Data Viewer
Location:
16q21
Annotation release Status Assembly Chr Location
RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 16 NC_000016.10 (60024388..60025141, complement)
RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 16 NC_060940.1 (65816222..65816976, complement)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 16 NC_000016.9 (60058292..60059045, complement)

Chromosome 16 - NC_000016.10Genomic Context describing neighboring genes Neighboring gene long intergenic non-protein coding RNA 2141 Neighboring gene uncharacterized LOC105371300 Neighboring gene uncharacterized LOC105371299 Neighboring gene OCT4-NANOG-H3K27ac hESC enhancer GRCh37_chr16:60112162-60113065 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr16:60114633-60115134 Neighboring gene OCT4-NANOG-H3K27ac hESC enhancer GRCh37_chr16:60117794-60118510 Neighboring gene OCT4-NANOG hESC enhancer GRCh37_chr16:60251661-60252265 Neighboring gene uncharacterized LOC101927605 Neighboring gene nuclear pore associated protein 1 like (pseudogene) Neighboring gene NANOG-H3K4me1 hESC enhancer GRCh37_chr16:60493067-60493566 Neighboring gene ReSE screen-validated silencer GRCh37_chr16:60572390-60572596 Neighboring gene glyceronephosphate O-acyltransferase pseudogene

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See studies and variants in dbVar

See Variation Viewer (GRCh37.p13)

See Variation Viewer (GRCh38)

General gene information

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Markers

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

Genomic

  1. NG_026373.2 

    Range
    101..854
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000016.10 Reference GRCh38.p14 Primary Assembly

    Range
    60024388..60025141 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060940.1 Alternate T2T-CHM13v2.0

    Range
    65816222..65816976 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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