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PDK1P1 pyruvate dehydrogenase kinase 1 pseudogene 1 [ Homo sapiens (human) ]

Gene ID: 100421194, updated on 17-Sep-2024

Summary

Official Symbol
PDK1P1provided by HGNC
Official Full Name
pyruvate dehydrogenase kinase 1 pseudogene 1provided by HGNC
Primary source
HGNC:HGNC:49808
See related
Ensembl:ENSG00000277646 AllianceGenome:HGNC:49808
Gene type
pseudo
RefSeq status
INFERRED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
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Genomic context

See PDK1P1 in Genome Data Viewer
Location:
9p21.1
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 9 NC_000009.12 (29317833..29318952)
RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 9 NC_060933.1 (29331494..29332613)
RS_2024_09 previous assembly GRCh37.p13 (GCF_000001405.25) 9 NC_000009.11 (29317831..29318950)

Chromosome 9 - NC_000009.12Genomic Context describing neighboring genes Neighboring gene leucine rich repeat and Ig domain containing 2 Neighboring gene NANOG hESC enhancer GRCh37_chr9:28929045-28929614 Neighboring gene NANOG hESC enhancer GRCh37_chr9:28938893-28939474 Neighboring gene OCT4-NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr9:28970143-28971066 Neighboring gene microRNA 876 Neighboring gene Neanderthal introgressed variant-containing enhancer experimental_107603 Neighboring gene microRNA 873 Neighboring gene Neanderthal introgressed variant-containing enhancer experimental_107631 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 19824 Neighboring gene NANOG hESC enhancer GRCh37_chr9:29251246-29251747 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 28256 Neighboring gene CDK7 strongly-dependent group 2 enhancer GRCh37_chr9:29439922-29441121 Neighboring gene BRD4-independent group 4 enhancer GRCh37_chr9:29450054-29451253 Neighboring gene CDK7 strongly-dependent group 2 enhancer GRCh37_chr9:29566267-29567466 Neighboring gene uncharacterized LOC105376005 Neighboring gene malic enzyme 2 pseudogene 1

Genomic regions, transcripts, and products

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

Genomic

  1. NG_023886.1 

    Range
    101..1220
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000009.12 Reference GRCh38.p14 Primary Assembly

    Range
    29317833..29318952
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060933.1 Alternate T2T-CHM13v2.0

    Range
    29331494..29332613
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)