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LOC100419870 zinc finger protein 717 pseudogene [ Homo sapiens (human) ]

Gene ID: 100419870, updated on 17-Sep-2024

Summary

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Gene symbol
LOC100419870
Gene description
zinc finger protein 717 pseudogene
Gene type
pseudo
RefSeq status
INFERRED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
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Genomic context

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See LOC100419870 in Genome Data Viewer
Location:
10q26.3
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 10 NC_000010.11 (130283229..130284245, complement)
RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 10 NC_060934.1 (131212271..131213287, complement)
RS_2024_09 previous assembly GRCh37.p13 (GCF_000001405.25) 10 NC_000010.10 (132081493..132082509, complement)

Chromosome 10 - NC_000010.11Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC105378561 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 2942 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 4210 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr10:131935765-131936400 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr10:131936401-131937035 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 4211 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 4212 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 4213 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr10:131966412-131966912 Neighboring gene peptidylprolyl isomerase A pseudogene 32 Neighboring gene uncharacterized LOC124902561 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr10:131988091-131988591 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 2944 Neighboring gene glutaredoxin 3 Neighboring gene uncharacterized LOC124900609 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr10:132152999-132153675 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr10:132176128-132176628 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr10:132176629-132177129 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr10:132197359-132197860 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr10:132197861-132198360 Neighboring gene H3K27ac hESC enhancer GRCh37_chr10:132294461-132294961 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr10:132310601-132311101 Neighboring gene H3K27ac hESC enhancer GRCh37_chr10:132358601-132359102 Neighboring gene ReSE screen-validated silencer GRCh37_chr10:132373035-132373208 Neighboring gene uncharacterized LOC105378562

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See studies and variants in dbVar

See Variation Viewer (GRCh37.p13)

See Variation Viewer (GRCh38)

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

Genomic

  1. NG_025468.1 

    Range
    101..1117
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000010.11 Reference GRCh38.p14 Primary Assembly

    Range
    130283229..130284245 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060934.1 Alternate T2T-CHM13v2.0

    Range
    131212271..131213287 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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